Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.75□□□□□ -1.97
TPM3P06753 MIR4325-201ENST00000583049 90 ntBASIC2.75□□□□□ -1.97
TPM3P06753 AL136363.1-201ENST00000605349 337 ntBASIC2.75□□□□□ -1.97
TPM3P06753 MIR8057-201ENST00000620957 69 ntBASIC2.75□□□□□ -1.97
TPM3P06753 AC068880.5-201ENST00000624331 290 ntBASIC2.75□□□□□ -1.97
TPM3P06753 AP003400.6-201ENST00000624698 740 ntBASIC2.75□□□□□ -1.97
TPM3P06753 SNORA71.3-201ENST00000362582 128 ntBASIC2.74□□□□□ -1.97
TPM3P06753 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TPM3P06753 PAICSP7-201ENST00000419829 962 ntBASIC2.74□□□□□ -1.97
TPM3P06753 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TPM3P06753 AL135938.1-201ENST00000443141 297 ntBASIC2.74□□□□□ -1.97
TPM3P06753 AL121871.1-201ENST00000443413 436 ntBASIC2.74□□□□□ -1.97
TPM3P06753 AC104389.3-201ENST00000445629 235 ntBASIC2.74□□□□□ -1.97
TPM3P06753 RSL24D1P3-201ENST00000449255 495 ntBASIC2.74□□□□□ -1.97
TPM3P06753 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.74□□□□□ -1.97
TPM3P06753 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.74□□□□□ -1.97
TPM3P06753 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.74□□□□□ -1.97
TPM3P06753 RNU6-760P-201ENST00000516078 97 ntBASIC2.74□□□□□ -1.97
TPM3P06753 OR4R2P-201ENST00000530815 597 ntBASIC2.74□□□□□ -1.97
TPM3P06753 OR8K4P-201ENST00000534608 872 ntBASIC2.74□□□□□ -1.97
TPM3P06753 AC022069.1-201ENST00000582910 658 ntBASIC2.74□□□□□ -1.97
TPM3P06753 AC012669.1-201ENST00000603209 283 ntBASIC2.74□□□□□ -1.97
TPM3P06753 AC016542.1-201ENST00000608259 493 ntBASIC2.74□□□□□ -1.97
TPM3P06753 AL159169.3-201ENST00000608871 561 ntBASIC2.74□□□□□ -1.97
TPM3P06753 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.74□□□□□ -1.97
TPM3P06753 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.74□□□□□ -1.97
TPM3P06753 AC111188.2-201ENST00000529697 1387 ntBASIC2.74□□□□□ -1.97
TPM3P06753 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
TPM3P06753 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.73□□□□□ -1.97
TPM3P06753 MIR21-201ENST00000362134 72 ntBASIC2.73□□□□□ -1.97
TPM3P06753 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
TPM3P06753 RPS3AP25-201ENST00000411660 793 ntBASIC2.73□□□□□ -1.97
TPM3P06753 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.73□□□□□ -1.97
TPM3P06753 MORF4L1P6-201ENST00000418771 268 ntBASIC2.73□□□□□ -1.97
TPM3P06753 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.73□□□□□ -1.97
TPM3P06753 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.73□□□□□ -1.97
TPM3P06753 MORF4L1P7-201ENST00000426038 703 ntBASIC2.73□□□□□ -1.97
TPM3P06753 MTCO1P39-201ENST00000426148 480 ntBASIC2.73□□□□□ -1.97
TPM3P06753 DNAJC19P8-201ENST00000452887 259 ntBASIC2.73□□□□□ -1.97
TPM3P06753 HMGN3P1-201ENST00000453847 193 ntBASIC2.73□□□□□ -1.97
TPM3P06753 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.73□□□□□ -1.97
TPM3P06753 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.73□□□□□ -1.97
TPM3P06753 HIGD1AP6-201ENST00000521833 279 ntBASIC2.73□□□□□ -1.97
TPM3P06753 AC087272.1-201ENST00000523624 533 ntBASIC2.73□□□□□ -1.97
TPM3P06753 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.73□□□□□ -1.97
TPM3P06753 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.73□□□□□ -1.97
TPM3P06753 AC078814.3-201ENST00000553036 491 ntBASIC2.73□□□□□ -1.97
TPM3P06753 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.73□□□□□ -1.97
TPM3P06753 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.73□□□□□ -1.97
TPM3P06753 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TPM3P06753 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.72□□□□□ -1.97
TPM3P06753 ZNF720P1-201ENST00000562403 1939 ntBASIC2.72□□□□□ -1.97
TPM3P06753 RNU6-40P-201ENST00000384254 107 ntBASIC2.72□□□□□ -1.97
TPM3P06753 RNU6-921P-201ENST00000384361 107 ntBASIC2.72□□□□□ -1.97
TPM3P06753 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TPM3P06753 HMGB3P31-201ENST00000413333 595 ntBASIC2.72□□□□□ -1.97
TPM3P06753 AL035410.1-201ENST00000427409 427 ntBASIC2.72□□□□□ -1.97
TPM3P06753 AL031659.1-201ENST00000447075 539 ntBASIC2.72□□□□□ -1.97
TPM3P06753 NANOGNBP1-201ENST00000448444 480 ntBASIC2.72□□□□□ -1.97
TPM3P06753 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.72□□□□□ -1.97
TPM3P06753 AC006445.2-201ENST00000510061 472 ntBASIC2.72□□□□□ -1.97
TPM3P06753 OR5BM1P-201ENST00000512021 366 ntBASIC2.72□□□□□ -1.97
TPM3P06753 TTC39CP1-201ENST00000512513 755 ntBASIC2.72□□□□□ -1.97
TPM3P06753 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.72□□□□□ -1.97
TPM3P06753 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.72□□□□□ -1.97
TPM3P06753 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.72□□□□□ -1.97
TPM3P06753 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TPM3P06753 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.72□□□□□ -1.97
TPM3P06753 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.72□□□□□ -1.97
TPM3P06753 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.72□□□□□ -1.97
TPM3P06753 AMZ2P1-203ENST00000565833 850 ntBASIC2.72□□□□□ -1.97
TPM3P06753 ISCA1P3-201ENST00000577104 373 ntBASIC2.72□□□□□ -1.97
TPM3P06753 AC021851.1-201ENST00000608537 1082 ntBASIC2.72□□□□□ -1.97
TPM3P06753 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.72□□□□□ -1.97
TPM3P06753 MIR6840-201ENST00000611937 71 ntBASIC2.72□□□□□ -1.97
TPM3P06753 AC009032.1-201ENST00000617574 431 ntBASIC2.72□□□□□ -1.97
TPM3P06753 AC040168.1-201ENST00000623594 991 ntBASIC2.72□□□□□ -1.97
TPM3P06753 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.72□□□□□ -1.97
TPM3P06753 SEC63P2-201ENST00000503863 1939 ntBASIC2.72□□□□□ -1.97
TPM3P06753 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TPM3P06753 AC087359.1-201ENST00000508335 1740 ntBASIC2.71□□□□□ -1.98
TPM3P06753 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
TPM3P06753 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.71□□□□□ -1.98
TPM3P06753 RNU6-859P-201ENST00000362728 107 ntBASIC2.71□□□□□ -1.98
TPM3P06753 RNU1-52P-201ENST00000384190 164 ntBASIC2.71□□□□□ -1.98
TPM3P06753 MIR649-201ENST00000384843 97 ntBASIC2.71□□□□□ -1.98
TPM3P06753 TAF9BP2-201ENST00000400856 499 ntBASIC2.71□□□□□ -1.98
TPM3P06753 SNORA11B-201ENST00000408175 129 ntBASIC2.71□□□□□ -1.98
TPM3P06753 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.71□□□□□ -1.98
TPM3P06753 AL158825.1-201ENST00000414735 521 ntBASIC2.71□□□□□ -1.98
TPM3P06753 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.71□□□□□ -1.98
TPM3P06753 RPP40P1-201ENST00000426762 456 ntBASIC2.71□□□□□ -1.98
TPM3P06753 ATP5F1P1-201ENST00000433775 569 ntBASIC2.71□□□□□ -1.98
TPM3P06753 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.71□□□□□ -1.98
TPM3P06753 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.71□□□□□ -1.98
TPM3P06753 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.71□□□□□ -1.98
TPM3P06753 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TPM3P06753 AC004217.3-201ENST00000551552 878 ntBASIC2.71□□□□□ -1.98
TPM3P06753 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.71□□□□□ -1.98
TPM3P06753 SRGNP1-201ENST00000603392 451 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms