Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AL356379.1-201ENST00000414105 126 ntBASIC2.04□□□□□ -2.08
APOC1P02654 MTCO3P30-201ENST00000426425 670 ntBASIC2.04□□□□□ -2.08
APOC1P02654 SGO1P2-201ENST00000429458 1589 ntBASIC2.04□□□□□ -2.08
APOC1P02654 AL590762.3-201ENST00000436372 640 ntBASIC2.04□□□□□ -2.08
APOC1P02654 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.04□□□□□ -2.08
APOC1P02654 AL831737.1-201ENST00000441288 271 ntBASIC2.04□□□□□ -2.08
APOC1P02654 SNRPGP6-201ENST00000451124 220 ntBASIC2.04□□□□□ -2.08
APOC1P02654 TRBV26-201ENST00000456572 344 ntBASIC2.04□□□□□ -2.08
APOC1P02654 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.04□□□□□ -2.08
APOC1P02654 AC096576.1-201ENST00000489014 359 ntBASIC2.04□□□□□ -2.08
APOC1P02654 AC111000.5-201ENST00000506559 1178 ntBASIC2.04□□□□□ -2.08
APOC1P02654 AC234781.5-201ENST00000508429 271 ntBASIC2.04□□□□□ -2.08
APOC1P02654 AC008413.1-201ENST00000511864 177 ntBASIC2.04□□□□□ -2.08
APOC1P02654 RNA5SP148-201ENST00000516527 94 ntBASIC2.04□□□□□ -2.08
APOC1P02654 RPL7P20-201ENST00000520308 745 ntBASIC2.04□□□□□ -2.08
APOC1P02654 AP001804.3-201ENST00000525146 880 ntBASIC2.04□□□□□ -2.08
APOC1P02654 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.04□□□□□ -2.08
APOC1P02654 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.04□□□□□ -2.08
APOC1P02654 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
APOC1P02654 AC008669.1-201ENST00000565823 2178 ntBASIC2.04□□□□□ -2.08
APOC1P02654 MIR5007-201ENST00000583098 95 ntBASIC2.04□□□□□ -2.08
APOC1P02654 MIR3117-201ENST00000584034 78 ntBASIC2.04□□□□□ -2.08
APOC1P02654 AC022031.1-201ENST00000585985 2593 ntBASIC2.04□□□□□ -2.08
APOC1P02654 AL009028.1-201ENST00000604895 802 ntBASIC2.04□□□□□ -2.08
APOC1P02654 AC135178.6-201ENST00000605314 398 ntBASIC2.04□□□□□ -2.08
APOC1P02654 AL121917.1-203ENST00000605534 577 ntBASIC2.04□□□□□ -2.08
APOC1P02654 BNIP3P7-201ENST00000605641 516 ntBASIC2.04□□□□□ -2.08
APOC1P02654 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.04□□□□□ -2.08
APOC1P02654 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
APOC1P02654 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
APOC1P02654 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
APOC1P02654 SNORA38-201ENST00000363946 132 ntBASIC2.03□□□□□ -2.08
APOC1P02654 RNU6-761P-201ENST00000384148 107 ntBASIC2.03□□□□□ -2.08
APOC1P02654 RNU6-244P-201ENST00000391028 104 ntBASIC2.03□□□□□ -2.08
APOC1P02654 MYL8P-204ENST00000431574 518 ntBASIC2.03□□□□□ -2.08
APOC1P02654 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.03□□□□□ -2.08
APOC1P02654 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.03□□□□□ -2.08
APOC1P02654 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.03□□□□□ -2.08
APOC1P02654 COX6CP12-201ENST00000446748 202 ntBASIC2.03□□□□□ -2.08
APOC1P02654 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
APOC1P02654 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.03□□□□□ -2.08
APOC1P02654 RPS3P1-201ENST00000456781 192 ntBASIC2.03□□□□□ -2.08
APOC1P02654 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.03□□□□□ -2.08
APOC1P02654 AC016065.2-201ENST00000514530 444 ntBASIC2.03□□□□□ -2.08
APOC1P02654 AP000867.2-201ENST00000532468 320 ntBASIC2.03□□□□□ -2.08
APOC1P02654 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.03□□□□□ -2.08
APOC1P02654 AGGF1P5-201ENST00000567900 919 ntBASIC2.03□□□□□ -2.08
APOC1P02654 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.03□□□□□ -2.08
APOC1P02654 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
APOC1P02654 AC009159.1-201ENST00000618386 642 ntBASIC2.03□□□□□ -2.08
APOC1P02654 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
APOC1P02654 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOC1P02654 AC069528.2-201ENST00000624849 1991 ntBASIC2.03□□□□□ -2.08
APOC1P02654 AC097714.1-201ENST00000511272 1647 ntBASIC2.02□□□□□ -2.09
APOC1P02654 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.02□□□□□ -2.09
APOC1P02654 HSPE1P11-201ENST00000339579 310 ntBASIC2.02□□□□□ -2.09
APOC1P02654 OR56A5-201ENST00000340110 738 ntBASIC2.02□□□□□ -2.09
APOC1P02654 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
APOC1P02654 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
APOC1P02654 SNORA46.1-201ENST00000391069 153 ntBASIC2.02□□□□□ -2.09
APOC1P02654 AL445529.1-201ENST00000398713 389 ntBASIC2.02□□□□□ -2.09
APOC1P02654 RPS4XP8-201ENST00000402039 771 ntBASIC2.02□□□□□ -2.09
APOC1P02654 AL591416.1-201ENST00000404015 867 ntBASIC2.02□□□□□ -2.09
APOC1P02654 AL513475.1-201ENST00000406602 315 ntBASIC2.02□□□□□ -2.09
APOC1P02654 ARL2BPP3-201ENST00000421226 480 ntBASIC2.02□□□□□ -2.09
APOC1P02654 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.02□□□□□ -2.09
APOC1P02654 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.02□□□□□ -2.09
APOC1P02654 PSPHP1-201ENST00000450062 261 ntBASIC2.02□□□□□ -2.09
APOC1P02654 NAP1L1P3-201ENST00000462291 880 ntBASIC2.02□□□□□ -2.09
APOC1P02654 AC097493.1-201ENST00000463958 372 ntBASIC2.02□□□□□ -2.09
APOC1P02654 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.02□□□□□ -2.09
APOC1P02654 TTC39CP1-201ENST00000512513 755 ntBASIC2.02□□□□□ -2.09
APOC1P02654 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.02□□□□□ -2.09
APOC1P02654 OR5AQ1P-201ENST00000527596 927 ntBASIC2.02□□□□□ -2.09
APOC1P02654 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.02□□□□□ -2.09
APOC1P02654 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.02□□□□□ -2.09
APOC1P02654 AC010546.1-201ENST00000569391 485 ntBASIC2.02□□□□□ -2.09
APOC1P02654 MTCO1P40-201ENST00000574371 625 ntBASIC2.02□□□□□ -2.09
APOC1P02654 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.02□□□□□ -2.09
APOC1P02654 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.02□□□□□ -2.09
APOC1P02654 AL033523.1-201ENST00000605153 153 ntBASIC2.02□□□□□ -2.09
APOC1P02654 AC026790.2-201ENST00000606282 430 ntBASIC2.02□□□□□ -2.09
APOC1P02654 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.02□□□□□ -2.09
APOC1P02654 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.02□□□□□ -2.09
APOC1P02654 MIR6766-201ENST00000622641 72 ntBASIC2.02□□□□□ -2.09
APOC1P02654 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.02□□□□□ -2.09
APOC1P02654 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
APOC1P02654 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
APOC1P02654 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
APOC1P02654 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
APOC1P02654 RNU1-51P-201ENST00000365345 176 ntBASIC2.01□□□□□ -2.09
APOC1P02654 SNORD23.1-201ENST00000408212 104 ntBASIC2.01□□□□□ -2.09
APOC1P02654 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.01□□□□□ -2.09
APOC1P02654 NPM1P11-201ENST00000417106 855 ntBASIC2.01□□□□□ -2.09
APOC1P02654 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.01□□□□□ -2.09
APOC1P02654 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.01□□□□□ -2.09
APOC1P02654 RNF19BPX-201ENST00000426224 625 ntBASIC2.01□□□□□ -2.09
APOC1P02654 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.01□□□□□ -2.09
APOC1P02654 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.01□□□□□ -2.09
APOC1P02654 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms