Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.19□□□□□ -1.9
MBD3O95983 AC024257.5-201ENST00000612739 531 ntBASIC3.19□□□□□ -1.9
MBD3O95983 CYCSP41-201ENST00000616920 296 ntBASIC3.19□□□□□ -1.9
MBD3O95983 AC120349.2-201ENST00000625002 298 ntBASIC3.19□□□□□ -1.9
MBD3O95983 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MBD3O95983 AC107982.1-201ENST00000507171 1300 ntBASIC3.19□□□□□ -1.9
MBD3O95983 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.18□□□□□ -1.9
MBD3O95983 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.18□□□□□ -1.9
MBD3O95983 API5P2-201ENST00000397055 1498 ntBASIC3.18□□□□□ -1.9
MBD3O95983 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MBD3O95983 RNU6-851P-201ENST00000384565 107 ntBASIC3.18□□□□□ -1.9
MBD3O95983 U3.19-201ENST00000390893 196 ntBASIC3.18□□□□□ -1.9
MBD3O95983 SNORA57.1-201ENST00000391227 145 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AL136372.1-201ENST00000403060 228 ntBASIC3.18□□□□□ -1.9
MBD3O95983 RPS15AP38-201ENST00000413110 372 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.18□□□□□ -1.9
MBD3O95983 HSPE1P1-201ENST00000421494 318 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.18□□□□□ -1.9
MBD3O95983 PSMA6P3-201ENST00000428242 164 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AC012497.1-201ENST00000429392 575 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.18□□□□□ -1.9
MBD3O95983 MTND2P20-201ENST00000440805 661 ntBASIC3.18□□□□□ -1.9
MBD3O95983 RPL21P133-201ENST00000443666 476 ntBASIC3.18□□□□□ -1.9
MBD3O95983 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.18□□□□□ -1.9
MBD3O95983 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.18□□□□□ -1.9
MBD3O95983 MLLT10P2-201ENST00000506434 249 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.18□□□□□ -1.9
MBD3O95983 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.18□□□□□ -1.9
MBD3O95983 AC112206.4-201ENST00000515142 405 ntBASIC3.18□□□□□ -1.9
MBD3O95983 SNORA31.26-201ENST00000517250 137 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.18□□□□□ -1.9
MBD3O95983 MTCO1P49-201ENST00000523429 802 ntBASIC3.18□□□□□ -1.9
MBD3O95983 SNRPGP16-201ENST00000533275 226 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.18□□□□□ -1.9
MBD3O95983 OR7K1P-201ENST00000546439 926 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.18□□□□□ -1.9
MBD3O95983 LARP7P2-201ENST00000575306 125 ntBASIC3.18□□□□□ -1.9
MBD3O95983 COX6CP3-201ENST00000580869 223 ntBASIC3.18□□□□□ -1.9
MBD3O95983 MIR4637-201ENST00000582405 84 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.18□□□□□ -1.9
MBD3O95983 AL356575.1-201ENST00000603008 283 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AP000787.2-201ENST00000604432 568 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AC069304.2-201ENST00000605154 435 ntBASIC3.18□□□□□ -1.9
MBD3O95983 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.18□□□□□ -1.9
MBD3O95983 AC008962.1-201ENST00000605729 304 ntBASIC3.18□□□□□ -1.9
MBD3O95983 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.18□□□□□ -1.9
MBD3O95983 AC131902.3-201ENST00000611767 581 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AC123767.1-202ENST00000620407 817 ntBASIC3.18□□□□□ -1.9
MBD3O95983 AC095031.1-201ENST00000623685 672 ntBASIC3.18□□□□□ -1.9
MBD3O95983 ZNF807-201ENST00000328088 1707 ntBASIC3.18□□□□□ -1.9
MBD3O95983 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MBD3O95983 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.18□□□□□ -1.9
MBD3O95983 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
MBD3O95983 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.17□□□□□ -1.9
MBD3O95983 AC006378.2-201ENST00000623178 2476 ntBASIC3.17□□□□□ -1.9
MBD3O95983 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
MBD3O95983 CDR1-202ENST00000625883 1485 ntBASIC3.17□□□□□ -1.9
MBD3O95983 SNRPEP3-201ENST00000338402 276 ntBASIC3.17□□□□□ -1.9
MBD3O95983 RNU6-1155P-201ENST00000363554 107 ntBASIC3.17□□□□□ -1.9
MBD3O95983 snoZ40.1-201ENST00000364540 72 ntBASIC3.17□□□□□ -1.9
MBD3O95983 DEFA7P-201ENST00000382676 285 ntBASIC3.17□□□□□ -1.9
MBD3O95983 AC005300.1-201ENST00000428401 373 ntBASIC3.17□□□□□ -1.9
MBD3O95983 RPL21P40-201ENST00000428586 483 ntBASIC3.17□□□□□ -1.9
MBD3O95983 AL159987.2-201ENST00000432754 307 ntBASIC3.17□□□□□ -1.9
MBD3O95983 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3O95983 GTF2IP3-201ENST00000433887 494 ntBASIC3.17□□□□□ -1.9
MBD3O95983 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3O95983 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3O95983 AC091862.1-201ENST00000438016 1100 ntBASIC3.17□□□□□ -1.9
MBD3O95983 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.17□□□□□ -1.9
MBD3O95983 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3O95983 RPL39P6-201ENST00000448289 150 ntBASIC3.17□□□□□ -1.9
MBD3O95983 AC140076.1-201ENST00000449897 361 ntBASIC3.17□□□□□ -1.9
MBD3O95983 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.17□□□□□ -1.9
MBD3O95983 RPL23AP31-201ENST00000456160 467 ntBASIC3.17□□□□□ -1.9
MBD3O95983 BTF3P5-201ENST00000457252 467 ntBASIC3.17□□□□□ -1.9
MBD3O95983 AC026410.2-201ENST00000460281 156 ntBASIC3.17□□□□□ -1.9
MBD3O95983 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3O95983 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3O95983 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3O95983 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3O95983 RNU1-45P-201ENST00000517191 141 ntBASIC3.17□□□□□ -1.9
MBD3O95983 AC090136.1-201ENST00000520009 240 ntBASIC3.17□□□□□ -1.9
MBD3O95983 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
MBD3O95983 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.17□□□□□ -1.9
MBD3O95983 HIGD1AP17-201ENST00000554576 276 ntBASIC3.17□□□□□ -1.9
MBD3O95983 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3O95983 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3O95983 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3O95983 FAM60BP-201ENST00000578364 658 ntBASIC3.17□□□□□ -1.9
MBD3O95983 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3O95983 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.17□□□□□ -1.9
MBD3O95983 AC060766.3-201ENST00000591442 263 ntBASIC3.17□□□□□ -1.9
MBD3O95983 AL022067.1-201ENST00000602426 454 ntBASIC3.17□□□□□ -1.9
MBD3O95983 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.17□□□□□ -1.9
MBD3O95983 BNIP3P11-201ENST00000603878 563 ntBASIC3.17□□□□□ -1.9
MBD3O95983 AC009237.15-201ENST00000610252 501 ntBASIC3.17□□□□□ -1.9
MBD3O95983 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.17□□□□□ -1.9
MBD3O95983 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
MBD3O95983 AC106858.1-201ENST00000637497 429 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms