Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN1O95832 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN1O95832 PCMTD1P2-201ENST00000565017 355 ntBASIC3.3□□□□□ -1.88
CLDN1O95832 AC012414.6-201ENST00000568241 401 ntBASIC3.3□□□□□ -1.88
CLDN1O95832 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN1O95832 AC141257.3-201ENST00000572906 215 ntBASIC3.3□□□□□ -1.88
CLDN1O95832 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN1O95832 AP000403.1-201ENST00000603349 851 ntBASIC3.3□□□□□ -1.88
CLDN1O95832 AC007566.2-201ENST00000603642 413 ntBASIC3.3□□□□□ -1.88
CLDN1O95832 AL031775.1-201ENST00000607014 887 ntBASIC3.3□□□□□ -1.88
CLDN1O95832 AC012360.2-201ENST00000609349 391 ntBASIC3.3□□□□□ -1.88
CLDN1O95832 AC122108.2-201ENST00000611946 526 ntBASIC3.3□□□□□ -1.88
CLDN1O95832 AC025594.3-201ENST00000613068 790 ntBASIC3.3□□□□□ -1.88
CLDN1O95832 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN1O95832 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN1O95832 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CLDN1O95832 HSPA8P1-201ENST00000425843 1833 ntBASIC3.3□□□□□ -1.88
CLDN1O95832 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN1O95832 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN1O95832 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN1O95832 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN1O95832 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
CLDN1O95832 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN1O95832 NCAPGP1-201ENST00000505112 1814 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN1O95832 RNU6-623P-201ENST00000363143 105 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 RNU6-501P-201ENST00000364072 100 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 RNU6-777P-201ENST00000364265 104 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 RNU6-952P-201ENST00000391164 108 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN1O95832 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN1O95832 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN1O95832 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN1O95832 AL353706.1-201ENST00000436728 494 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 RSU1P2-202ENST00000437884 485 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 AC083863.1-201ENST00000438811 231 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN1O95832 MTND5P14-201ENST00000441481 1267 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 EPS15P1-201ENST00000448836 336 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 RPL36AP33-201ENST00000450395 310 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 AC116337.2-201ENST00000477662 156 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN1O95832 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN1O95832 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN1O95832 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN1O95832 RNU2-27P-201ENST00000516185 142 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 SNORA70.14-201ENST00000516205 110 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 RNA5SP164-201ENST00000516533 110 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 Y_RNA.695-201ENST00000516715 107 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 RN7SKP234-201ENST00000517173 224 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 RPL12P22-201ENST00000519073 490 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CLDN1O95832 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN1O95832 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN1O95832 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN1O95832 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN1O95832 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN1O95832 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN1O95832 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.29□□□□□ -1.88
CLDN1O95832 MIR5186-201ENST00000577504 120 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 RSL24D1P11-201ENST00000591045 491 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 LLPHP1-201ENST00000603571 367 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 AC112187.2-201ENST00000604345 283 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 AL451064.1-201ENST00000607718 471 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CLDN1O95832 FAM35DP-201ENST00000323387 2712 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN1O95832 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CLDN1O95832 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN1O95832 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN1O95832 PABPC1P7-201ENST00000413177 1513 ntBASIC3.29□□□□□ -1.88
CLDN1O95832 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CLDN1O95832 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CLDN1O95832 AC006504.1-201ENST00000562493 3666 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN1O95832 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN1O95832 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN1O95832 Y_RNA.97-201ENST00000363094 102 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN1O95832 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CLDN1O95832 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN1O95832 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN1O95832 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN1O95832 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN1O95832 AL365184.2-201ENST00000431139 435 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 EZH2P1-201ENST00000431167 291 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN1O95832 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN1O95832 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN1O95832 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN1O95832 BMI1P1-201ENST00000445879 941 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 ANP32BP2-201ENST00000454525 545 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AP000873.1-201ENST00000463987 400 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC093767.1-201ENST00000504523 156 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC004069.2-201ENST00000505438 1114 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
CLDN1O95832 AC010424.1-201ENST00000506336 297 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 MTCO3P7-201ENST00000510008 774 ntBASIC3.28□□□□□ -1.88
CLDN1O95832 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms