Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
VPS4BO75351 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS4BO75351 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS4BO75351 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS4BO75351 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS4BO75351 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VPS4BO75351 RNU5E-4P-201ENST00000364931 120 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 RNU6-169P-201ENST00000365336 107 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 RHOT1P2-201ENST00000366423 333 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 RNU1-39P-201ENST00000383897 165 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 RNU6-761P-201ENST00000384148 107 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 MIR93-201ENST00000385024 80 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 RPL7P60-201ENST00000397636 735 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 RNA5SP56-201ENST00000410277 118 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 RNU6-628P-201ENST00000410675 107 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 MIR1911-201ENST00000410783 80 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS4BO75351 AC011933.1-201ENST00000413334 321 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 RPL30P16-201ENST00000419341 429 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 RWDD4P2-201ENST00000426392 563 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS4BO75351 AC006548.1-201ENST00000427470 102 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.27□□□□□ -1.73
VPS4BO75351 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 AL662791.1-201ENST00000441992 928 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS4BO75351 AC116533.1-201ENST00000459748 321 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 RPS29P25-201ENST00000481709 171 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 AC023194.1-201ENST00000493084 308 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 RN7SL812P-201ENST00000493791 279 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS4BO75351 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS4BO75351 AC020593.1-201ENST00000507399 299 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS4BO75351 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS4BO75351 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS4BO75351 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS4BO75351 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS4BO75351 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS4BO75351 AC025678.1-201ENST00000567861 338 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS4BO75351 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS4BO75351 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS4BO75351 AC068790.3-201ENST00000602988 553 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 MIR432-201ENST00000606207 94 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 OR6R2P-201ENST00000609216 300 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 AC006338.1-201ENST00000618453 749 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS4BO75351 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS4BO75351 AP000843.1-201ENST00000624880 701 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 CR381572.1-201ENST00000625098 102 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 AC006065.6-201ENST00000625201 545 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS4BO75351 LRRC77P-213ENST00000637727 880 ntBASIC4.27□□□□□ -1.73
VPS4BO75351 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS4BO75351 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS4BO75351 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
VPS4BO75351 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS4BO75351 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
VPS4BO75351 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS4BO75351 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS4BO75351 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS4BO75351 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS4BO75351 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS4BO75351 RNU6-1085P-201ENST00000363576 107 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 RNU6-1090P-201ENST00000364065 94 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 RNU6-534P-201ENST00000364877 106 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 SNORA70E-201ENST00000384492 135 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VPS4BO75351 RPL23AP48-201ENST00000406913 488 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.26□□□□□ -1.73
VPS4BO75351 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS4BO75351 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS4BO75351 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS4BO75351 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS4BO75351 AL353193.1-201ENST00000421444 268 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 AL356387.2-201ENST00000422272 243 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS4BO75351 AC005517.2-201ENST00000424673 553 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 ELOCP18-201ENST00000434209 337 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS4BO75351 NFU1P2-201ENST00000448700 469 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 NDUFS5P3-201ENST00000450668 321 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS4BO75351 AC133473.1-201ENST00000455173 299 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS4BO75351 RPS27AP17-201ENST00000463344 455 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS4BO75351 AC091167.1-201ENST00000492017 396 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 AC069439.1-201ENST00000494739 167 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 AL139099.1-201ENST00000497398 403 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS4BO75351 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS4BO75351 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS4BO75351 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.26□□□□□ -1.73
VPS4BO75351 AC105914.1-201ENST00000511798 226 ntBASIC4.26□□□□□ -1.73
VPS4BO75351 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS4BO75351 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS4BO75351 AC022616.3-201ENST00000523940 148 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms