Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.19□□□□□ -1.9
SDC3O75056 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.19□□□□□ -1.9
SDC3O75056 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.19□□□□□ -1.9
SDC3O75056 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.19□□□□□ -1.9
SDC3O75056 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.19□□□□□ -1.9
SDC3O75056 AL049838.1-201ENST00000563647 981 ntBASIC3.19□□□□□ -1.9
SDC3O75056 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.19□□□□□ -1.9
SDC3O75056 MIR4474-201ENST00000579189 78 ntBASIC3.19□□□□□ -1.9
SDC3O75056 MIR4637-201ENST00000582405 84 ntBASIC3.19□□□□□ -1.9
SDC3O75056 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.19□□□□□ -1.9
SDC3O75056 MTND3P19-201ENST00000603825 345 ntBASIC3.19□□□□□ -1.9
SDC3O75056 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.19□□□□□ -1.9
SDC3O75056 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.19□□□□□ -1.9
SDC3O75056 AL157817.1-201ENST00000614264 790 ntBASIC3.19□□□□□ -1.9
SDC3O75056 MIR1322-201ENST00000638013 71 ntBASIC3.19□□□□□ -1.9
SDC3O75056 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.19□□□□□ -1.9
SDC3O75056 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SDC3O75056 AC007496.3-201ENST00000624987 3443 ntBASIC3.19□□□□□ -1.9
SDC3O75056 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SDC3O75056 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.19□□□□□ -1.9
SDC3O75056 AC099786.3-201ENST00000565735 1410 ntBASIC3.19□□□□□ -1.9
SDC3O75056 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
SDC3O75056 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SDC3O75056 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.18□□□□□ -1.9
SDC3O75056 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.18□□□□□ -1.9
SDC3O75056 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.18□□□□□ -1.9
SDC3O75056 OR5H2-201ENST00000355273 945 ntBASIC3.18□□□□□ -1.9
SDC3O75056 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SDC3O75056 RNU6-621P-201ENST00000364752 109 ntBASIC3.18□□□□□ -1.9
SDC3O75056 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.18□□□□□ -1.9
SDC3O75056 EZH2P1-201ENST00000431167 291 ntBASIC3.18□□□□□ -1.9
SDC3O75056 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SDC3O75056 AL645638.1-201ENST00000440519 361 ntBASIC3.18□□□□□ -1.9
SDC3O75056 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.18□□□□□ -1.9
SDC3O75056 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.18□□□□□ -1.9
SDC3O75056 AC026410.2-201ENST00000460281 156 ntBASIC3.18□□□□□ -1.9
SDC3O75056 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
SDC3O75056 RPL23AP67-201ENST00000465341 474 ntBASIC3.18□□□□□ -1.9
SDC3O75056 ST13P14-201ENST00000474095 734 ntBASIC3.18□□□□□ -1.9
SDC3O75056 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SDC3O75056 AC021146.5-201ENST00000503544 545 ntBASIC3.18□□□□□ -1.9
SDC3O75056 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.18□□□□□ -1.9
SDC3O75056 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.18□□□□□ -1.9
SDC3O75056 RNU6-1095P-201ENST00000516148 108 ntBASIC3.18□□□□□ -1.9
SDC3O75056 AC107934.2-201ENST00000518653 310 ntBASIC3.18□□□□□ -1.9
SDC3O75056 HSPA8P13-201ENST00000523715 472 ntBASIC3.18□□□□□ -1.9
SDC3O75056 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SDC3O75056 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SDC3O75056 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.18□□□□□ -1.9
SDC3O75056 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.18□□□□□ -1.9
SDC3O75056 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.18□□□□□ -1.9
SDC3O75056 AC023813.2-201ENST00000564321 469 ntBASIC3.18□□□□□ -1.9
SDC3O75056 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SDC3O75056 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.18□□□□□ -1.9
SDC3O75056 MTCO2P2-201ENST00000591258 225 ntBASIC3.18□□□□□ -1.9
SDC3O75056 AC106028.5-201ENST00000610332 395 ntBASIC3.18□□□□□ -1.9
SDC3O75056 AC107075.1-201ENST00000613695 314 ntBASIC3.18□□□□□ -1.9
SDC3O75056 AC006213.4-201ENST00000616184 634 ntBASIC3.18□□□□□ -1.9
SDC3O75056 AC068831.7-201ENST00000616954 363 ntBASIC3.18□□□□□ -1.9
SDC3O75056 AC109809.1-201ENST00000619665 545 ntBASIC3.18□□□□□ -1.9
SDC3O75056 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SDC3O75056 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SDC3O75056 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SDC3O75056 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SDC3O75056 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.17□□□□□ -1.9
SDC3O75056 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.17□□□□□ -1.9
SDC3O75056 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SDC3O75056 SNORD116.1-201ENST00000365628 92 ntBASIC3.17□□□□□ -1.9
SDC3O75056 RNU6-805P-201ENST00000365643 106 ntBASIC3.17□□□□□ -1.9
SDC3O75056 RNU6-906P-201ENST00000384700 70 ntBASIC3.17□□□□□ -1.9
SDC3O75056 SNORA48.8-201ENST00000391324 134 ntBASIC3.17□□□□□ -1.9
SDC3O75056 AL136116.1-201ENST00000403591 381 ntBASIC3.17□□□□□ -1.9
SDC3O75056 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SDC3O75056 RPS7P13-201ENST00000413955 498 ntBASIC3.17□□□□□ -1.9
SDC3O75056 AL356968.1-201ENST00000416622 474 ntBASIC3.17□□□□□ -1.9
SDC3O75056 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.17□□□□□ -1.9
SDC3O75056 AC084290.1-201ENST00000434995 374 ntBASIC3.17□□□□□ -1.9
SDC3O75056 HIGD1AP11-201ENST00000438361 280 ntBASIC3.17□□□□□ -1.9
SDC3O75056 ATP5C1P1-201ENST00000441945 895 ntBASIC3.17□□□□□ -1.9
SDC3O75056 RPL18AP17-201ENST00000455326 198 ntBASIC3.17□□□□□ -1.9
SDC3O75056 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SDC3O75056 RN7SL442P-201ENST00000473804 320 ntBASIC3.17□□□□□ -1.9
SDC3O75056 AC092185.1-201ENST00000491371 97 ntBASIC3.17□□□□□ -1.9
SDC3O75056 AC114981.1-201ENST00000503897 678 ntBASIC3.17□□□□□ -1.9
SDC3O75056 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.17□□□□□ -1.9
SDC3O75056 MTND2P32-201ENST00000521584 1038 ntBASIC3.17□□□□□ -1.9
SDC3O75056 AP001804.3-201ENST00000525146 880 ntBASIC3.17□□□□□ -1.9
SDC3O75056 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.17□□□□□ -1.9
SDC3O75056 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.17□□□□□ -1.9
SDC3O75056 TRAV37-201ENST00000553906 342 ntBASIC3.17□□□□□ -1.9
SDC3O75056 AL391156.1-201ENST00000554965 554 ntBASIC3.17□□□□□ -1.9
SDC3O75056 AC090695.1-201ENST00000561269 1222 ntBASIC3.17□□□□□ -1.9
SDC3O75056 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.17□□□□□ -1.9
SDC3O75056 AC006539.2-201ENST00000601729 572 ntBASIC3.17□□□□□ -1.9
SDC3O75056 BDH2P1-201ENST00000602288 736 ntBASIC3.17□□□□□ -1.9
SDC3O75056 AL451074.6-201ENST00000608512 729 ntBASIC3.17□□□□□ -1.9
SDC3O75056 AC018692.3-201ENST00000623929 123 ntBASIC3.17□□□□□ -1.9
SDC3O75056 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.17□□□□□ -1.9
SDC3O75056 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.17□□□□□ -1.9
SDC3O75056 AL137790.1-201ENST00000634283 177 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms