Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.67□□□□□ -1.98
SHOX2O60902 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.67□□□□□ -1.98
SHOX2O60902 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.67□□□□□ -1.98
SHOX2O60902 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.67□□□□□ -1.98
SHOX2O60902 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.67□□□□□ -1.98
SHOX2O60902 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.66□□□□□ -1.98
SHOX2O60902 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.66□□□□□ -1.98
SHOX2O60902 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
SHOX2O60902 CD24P4-201ENST00000382840 243 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 RNU6-730P-201ENST00000383954 104 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 Y_RNA.466-201ENST00000384294 113 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 RNU6-921P-201ENST00000384361 107 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 AF274854.1-201ENST00000413236 615 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 AC003685.2-201ENST00000422795 395 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 RPP40P1-201ENST00000426762 456 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 TOMM20P4-201ENST00000427861 435 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.66□□□□□ -1.98
SHOX2O60902 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.66□□□□□ -1.98
SHOX2O60902 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.66□□□□□ -1.98
SHOX2O60902 AC104073.1-201ENST00000451988 151 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 SNORA31.8-201ENST00000516327 108 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 AC100870.1-201ENST00000522035 505 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 AC018630.1-201ENST00000541376 925 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.66□□□□□ -1.98
SHOX2O60902 MIR4446-201ENST00000578505 67 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 MIR4435-1-201ENST00000582552 80 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.66□□□□□ -1.98
SHOX2O60902 AC091057.2-201ENST00000602594 792 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.66□□□□□ -1.98
SHOX2O60902 AL645944.1-201ENST00000603857 493 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SHOX2O60902 AP000676.4-201ENST00000624659 623 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.66□□□□□ -1.98
SHOX2O60902 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SHOX2O60902 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.66□□□□□ -1.98
SHOX2O60902 OR5BR1P-201ENST00000524992 1330 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 AC012321.1-201ENST00000561622 1588 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 CUL1P1-201ENST00000509510 2425 ntBASIC2.66□□□□□ -1.98
SHOX2O60902 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
SHOX2O60902 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SHOX2O60902 SNORA71.1-201ENST00000364523 117 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.65□□□□□ -1.99
SHOX2O60902 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SHOX2O60902 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 USP9YP27-201ENST00000418455 438 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.65□□□□□ -1.99
SHOX2O60902 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
SHOX2O60902 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.65□□□□□ -1.99
SHOX2O60902 AC005002.1-201ENST00000447458 540 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 MTND3P4-201ENST00000453537 303 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.65□□□□□ -1.99
SHOX2O60902 RPL31P50-201ENST00000471002 296 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 AC025181.1-201ENST00000477507 416 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 AC096751.1-202ENST00000502691 1067 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 VN1R104P-201ENST00000505115 1009 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.65□□□□□ -1.99
SHOX2O60902 EEF1A1P37-201ENST00000522748 715 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 AC087241.2-201ENST00000535801 324 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 LSM6P2-201ENST00000552208 177 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 MIR4635-201ENST00000583759 79 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.65□□□□□ -1.99
SHOX2O60902 KATNBL1P1-201ENST00000605192 748 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 AP004247.3-201ENST00000608682 624 ntBASIC2.65□□□□□ -1.99
SHOX2O60902 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SHOX2O60902 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SHOX2O60902 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SHOX2O60902 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
SHOX2O60902 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.65□□□□□ -1.99
SHOX2O60902 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHOX2O60902 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SHOX2O60902 AL356057.1-202ENST00000402263 756 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 ATG3P1-201ENST00000419507 911 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.64□□□□□ -1.99
SHOX2O60902 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.64□□□□□ -1.99
SHOX2O60902 MORF4L1P7-201ENST00000426038 703 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 AL035407.1-201ENST00000429211 571 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.64□□□□□ -1.99
SHOX2O60902 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.64□□□□□ -1.99
SHOX2O60902 MTND2P19-201ENST00000449129 1012 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 RSL24D1P3-201ENST00000449255 495 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.64□□□□□ -1.99
SHOX2O60902 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 RPL21P131-201ENST00000497298 483 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.64□□□□□ -1.99
SHOX2O60902 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 IGJP1-201ENST00000522682 475 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 AC124293.1-201ENST00000530034 493 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.64□□□□□ -1.99
SHOX2O60902 SNRPGP16-201ENST00000533275 226 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.64□□□□□ -1.99
SHOX2O60902 OSBPL9P3-201ENST00000534523 595 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SHOX2O60902 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.64□□□□□ -1.99
SHOX2O60902 DUXAP4-201ENST00000603046 613 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 RPL23AP92-201ENST00000603609 255 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 AC087241.4-201ENST00000612441 480 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.64□□□□□ -1.99
SHOX2O60902 MIR6076-201ENST00000617521 113 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms