Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LMX1BO60663 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LMX1BO60663 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.45□□□□□ -1.86
LMX1BO60663 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
LMX1BO60663 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LMX1BO60663 CCT4P2-201ENST00000233836 1548 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.45□□□□□ -1.86
LMX1BO60663 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LMX1BO60663 UBE3AP2-201ENST00000429033 2259 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.45□□□□□ -1.86
LMX1BO60663 RPL23AP57-201ENST00000332361 466 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 RNA5SP399-201ENST00000364003 117 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 RNU4-12P-201ENST00000365233 139 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 Y_RNA.333-201ENST00000365274 102 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 Y_RNA.372-201ENST00000365599 102 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.45□□□□□ -1.86
LMX1BO60663 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.45□□□□□ -1.86
LMX1BO60663 RNU6-761P-201ENST00000384148 107 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 Y_RNA.450-201ENST00000384198 113 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 RPS20P2-201ENST00000402520 389 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 CCNG1P1-201ENST00000406783 885 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 RAP1BP3-201ENST00000407180 549 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 RNU2-21P-201ENST00000410368 188 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 AL133384.1-201ENST00000412744 351 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.45□□□□□ -1.86
LMX1BO60663 AC069157.1-201ENST00000421749 137 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.45□□□□□ -1.86
LMX1BO60663 AL662791.1-201ENST00000441992 928 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.45□□□□□ -1.86
LMX1BO60663 AP000542.1-201ENST00000448473 371 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 AC079448.1-201ENST00000449377 373 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 PSPHP1-201ENST00000450062 261 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.45□□□□□ -1.86
LMX1BO60663 IFNWP4-201ENST00000453148 294 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 AL354710.1-201ENST00000453641 246 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 BX322784.1-201ENST00000455793 1077 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.45□□□□□ -1.86
LMX1BO60663 AC069439.1-201ENST00000494739 167 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.45□□□□□ -1.86
LMX1BO60663 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.45□□□□□ -1.86
LMX1BO60663 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.45□□□□□ -1.86
LMX1BO60663 PRDX4P1-201ENST00000507189 574 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 ARL4AP2-201ENST00000507378 601 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.45□□□□□ -1.86
LMX1BO60663 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.45□□□□□ -1.86
LMX1BO60663 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.45□□□□□ -1.86
LMX1BO60663 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.45□□□□□ -1.86
LMX1BO60663 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.45□□□□□ -1.86
LMX1BO60663 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.45□□□□□ -1.86
LMX1BO60663 AC068790.5-201ENST00000602741 355 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 OR6R2P-201ENST00000609216 300 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 AC103710.1-201ENST00000610003 901 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 MIR6868-201ENST00000611215 58 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 MIR6500-201ENST00000622700 86 ntBASIC3.45□□□□□ -1.86
LMX1BO60663 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.45□□□□□ -1.86
LMX1BO60663 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LMX1BO60663 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.45□□□□□ -1.86
LMX1BO60663 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.45□□□□□ -1.86
LMX1BO60663 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LMX1BO60663 OR11H5P-202ENST00000641612 1325 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
LMX1BO60663 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMX1BO60663 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMX1BO60663 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LMX1BO60663 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LMX1BO60663 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.44□□□□□ -1.86
LMX1BO60663 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMX1BO60663 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LMX1BO60663 MIR208A-201ENST00000362287 71 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 SNORA71.3-201ENST00000362582 128 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 RNU1-89P-201ENST00000384592 164 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 MIR7-3-201ENST00000384898 110 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 GSTA9P-201ENST00000406231 611 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 RNU6-195P-201ENST00000411352 109 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 BX295541.1-201ENST00000417774 250 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.44□□□□□ -1.86
LMX1BO60663 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.44□□□□□ -1.86
LMX1BO60663 USP9YP36-201ENST00000424581 829 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AC009965.2-201ENST00000425328 970 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AL589872.1-201ENST00000426602 288 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 YME1L1P1-201ENST00000429435 297 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AL445584.1-201ENST00000431451 330 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AL358934.1-201ENST00000432346 324 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.44□□□□□ -1.86
LMX1BO60663 HMGB1P31-201ENST00000437242 427 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.44□□□□□ -1.86
LMX1BO60663 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.44□□□□□ -1.86
LMX1BO60663 AC002381.1-201ENST00000447049 280 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 RPS17P13-201ENST00000448974 407 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.44□□□□□ -1.86
LMX1BO60663 FABP3P2-201ENST00000453169 399 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 RPS3AP14-201ENST00000483907 780 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 FTH1P24-201ENST00000503502 462 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 BTF3L4P4-201ENST00000506381 449 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AC074344.1-201ENST00000512823 224 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AC008549.1-201ENST00000512900 643 ntBASIC3.44□□□□□ -1.86
LMX1BO60663 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.44□□□□□ -1.86
LMX1BO60663 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.44□□□□□ -1.86
LMX1BO60663 ZNF705CP-201ENST00000530515 889 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms