Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LDB2O43679 AL161781.1-201ENST00000354277 403 ntBASIC3.8□□□□□ -1.8
LDB2O43679 RNU6-28P-201ENST00000362378 107 ntBASIC3.8□□□□□ -1.8
LDB2O43679 RNU6-730P-201ENST00000383954 104 ntBASIC3.8□□□□□ -1.8
LDB2O43679 SOD2P1-201ENST00000396543 562 ntBASIC3.8□□□□□ -1.8
LDB2O43679 AL590704.1-201ENST00000402856 794 ntBASIC3.8□□□□□ -1.8
LDB2O43679 SNORA3.3-201ENST00000408712 125 ntBASIC3.8□□□□□ -1.8
LDB2O43679 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB2O43679 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.8□□□□□ -1.8
LDB2O43679 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB2O43679 SDCBPP1-201ENST00000440192 890 ntBASIC3.8□□□□□ -1.8
LDB2O43679 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LDB2O43679 MTND1P1-201ENST00000445453 368 ntBASIC3.8□□□□□ -1.8
LDB2O43679 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB2O43679 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.8□□□□□ -1.8
LDB2O43679 HMGB1P15-201ENST00000453854 435 ntBASIC3.8□□□□□ -1.8
LDB2O43679 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.8□□□□□ -1.8
LDB2O43679 AC022034.3-201ENST00000471393 478 ntBASIC3.8□□□□□ -1.8
LDB2O43679 AL358832.1-201ENST00000497800 389 ntBASIC3.8□□□□□ -1.8
LDB2O43679 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB2O43679 AC105252.1-201ENST00000503089 286 ntBASIC3.8□□□□□ -1.8
LDB2O43679 AC093677.1-201ENST00000514414 678 ntBASIC3.8□□□□□ -1.8
LDB2O43679 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB2O43679 RNA5SP164-201ENST00000516533 110 ntBASIC3.8□□□□□ -1.8
LDB2O43679 RN7SKP277-201ENST00000516895 283 ntBASIC3.8□□□□□ -1.8
LDB2O43679 MTND4LP26-201ENST00000518144 282 ntBASIC3.8□□□□□ -1.8
LDB2O43679 AP003467.2-201ENST00000520175 319 ntBASIC3.8□□□□□ -1.8
LDB2O43679 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB2O43679 AC022695.1-201ENST00000522089 237 ntBASIC3.8□□□□□ -1.8
LDB2O43679 HSPE1P5-201ENST00000561489 272 ntBASIC3.8□□□□□ -1.8
LDB2O43679 AC137800.2-201ENST00000574375 120 ntBASIC3.8□□□□□ -1.8
LDB2O43679 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB2O43679 BNIP3P33-201ENST00000598912 569 ntBASIC3.8□□□□□ -1.8
LDB2O43679 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB2O43679 AC025588.3-201ENST00000604182 274 ntBASIC3.8□□□□□ -1.8
LDB2O43679 AL139286.1-201ENST00000604465 483 ntBASIC3.8□□□□□ -1.8
LDB2O43679 BRDTP1-201ENST00000605735 677 ntBASIC3.8□□□□□ -1.8
LDB2O43679 HMGB1P50-201ENST00000605814 607 ntBASIC3.8□□□□□ -1.8
LDB2O43679 AC098614.4-201ENST00000607601 462 ntBASIC3.8□□□□□ -1.8
LDB2O43679 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB2O43679 AC006133.1-201ENST00000617106 264 ntBASIC3.8□□□□□ -1.8
LDB2O43679 AC091905.1-201ENST00000624400 311 ntBASIC3.8□□□□□ -1.8
LDB2O43679 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB2O43679 AC099654.13-201ENST00000639774 207 ntBASIC3.8□□□□□ -1.8
LDB2O43679 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB2O43679 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB2O43679 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB2O43679 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB2O43679 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB2O43679 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LDB2O43679 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
LDB2O43679 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDB2O43679 NUP58P1-201ENST00000502546 1738 ntBASIC3.79□□□□□ -1.8
LDB2O43679 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB2O43679 RNA5SP322-201ENST00000363617 119 ntBASIC3.79□□□□□ -1.8
LDB2O43679 U3.15-201ENST00000365398 212 ntBASIC3.79□□□□□ -1.8
LDB2O43679 RNU1-89P-201ENST00000384592 164 ntBASIC3.79□□□□□ -1.8
LDB2O43679 RNU6ATAC-201ENST00000408749 126 ntBASIC3.79□□□□□ -1.8
LDB2O43679 PSMA6P3-201ENST00000428242 164 ntBASIC3.79□□□□□ -1.8
LDB2O43679 AC073614.1-201ENST00000438690 650 ntBASIC3.79□□□□□ -1.8
LDB2O43679 MTND6P13-201ENST00000443510 523 ntBASIC3.79□□□□□ -1.8
LDB2O43679 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB2O43679 NANOGNBP1-201ENST00000448444 480 ntBASIC3.79□□□□□ -1.8
LDB2O43679 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB2O43679 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB2O43679 UBDP1-202ENST00000457888 382 ntBASIC3.79□□□□□ -1.8
LDB2O43679 AC126182.1-201ENST00000478134 357 ntBASIC3.79□□□□□ -1.8
LDB2O43679 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB2O43679 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB2O43679 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB2O43679 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB2O43679 AC093853.1-201ENST00000515689 483 ntBASIC3.79□□□□□ -1.8
LDB2O43679 SNORA18.6-201ENST00000516792 115 ntBASIC3.79□□□□□ -1.8
LDB2O43679 RNA5SP143-201ENST00000516936 115 ntBASIC3.79□□□□□ -1.8
LDB2O43679 IGLVIV-53-201ENST00000520107 367 ntBASIC3.79□□□□□ -1.8
LDB2O43679 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB2O43679 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.79□□□□□ -1.8
LDB2O43679 CYCSP30-201ENST00000546447 172 ntBASIC3.79□□□□□ -1.8
LDB2O43679 AC087883.1-201ENST00000551882 391 ntBASIC3.79□□□□□ -1.8
LDB2O43679 RPL21P5-201ENST00000554662 472 ntBASIC3.79□□□□□ -1.8
LDB2O43679 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB2O43679 AC087481.2-201ENST00000565492 330 ntBASIC3.79□□□□□ -1.8
LDB2O43679 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB2O43679 MIR4801-201ENST00000582704 82 ntBASIC3.79□□□□□ -1.8
LDB2O43679 YWHAQP7-201ENST00000603536 658 ntBASIC3.79□□□□□ -1.8
LDB2O43679 AL022154.1-201ENST00000604698 785 ntBASIC3.79□□□□□ -1.8
LDB2O43679 RBM11P1-201ENST00000604951 799 ntBASIC3.79□□□□□ -1.8
LDB2O43679 AC010680.4-201ENST00000605334 543 ntBASIC3.79□□□□□ -1.8
LDB2O43679 AC126118.1-201ENST00000607744 628 ntBASIC3.79□□□□□ -1.8
LDB2O43679 AC068944.2-201ENST00000610373 403 ntBASIC3.79□□□□□ -1.8
LDB2O43679 AL354798.1-201ENST00000622505 329 ntBASIC3.79□□□□□ -1.8
LDB2O43679 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
LDB2O43679 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB2O43679 NCAPGP1-201ENST00000505112 1814 ntBASIC3.79□□□□□ -1.8
LDB2O43679 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB2O43679 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB2O43679 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.78□□□□□ -1.8
LDB2O43679 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
LDB2O43679 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LDB2O43679 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms