Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SGCEO43556 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SGCEO43556 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SGCEO43556 NACA3P-201ENST00000359690 648 ntBASIC2.47□□□□□ -2.01
SGCEO43556 SNORA51.6-201ENST00000384151 125 ntBASIC2.47□□□□□ -2.01
SGCEO43556 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SGCEO43556 RNU2-25P-201ENST00000411041 191 ntBASIC2.47□□□□□ -2.01
SGCEO43556 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.47□□□□□ -2.01
SGCEO43556 AL356320.2-201ENST00000417263 507 ntBASIC2.47□□□□□ -2.01
SGCEO43556 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.47□□□□□ -2.01
SGCEO43556 RPL31P54-201ENST00000429803 370 ntBASIC2.47□□□□□ -2.01
SGCEO43556 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.47□□□□□ -2.01
SGCEO43556 AL121871.1-201ENST00000443413 436 ntBASIC2.47□□□□□ -2.01
SGCEO43556 HSFY3P-201ENST00000444242 1191 ntBASIC2.47□□□□□ -2.01
SGCEO43556 NANOGNBP1-201ENST00000448444 480 ntBASIC2.47□□□□□ -2.01
SGCEO43556 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SGCEO43556 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.47□□□□□ -2.01
SGCEO43556 TBCAP3-201ENST00000512475 312 ntBASIC2.47□□□□□ -2.01
SGCEO43556 HMGB1P41-201ENST00000520234 440 ntBASIC2.47□□□□□ -2.01
SGCEO43556 MTCO1P47-201ENST00000523889 1271 ntBASIC2.47□□□□□ -2.01
SGCEO43556 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.47□□□□□ -2.01
SGCEO43556 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.47□□□□□ -2.01
SGCEO43556 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.47□□□□□ -2.01
SGCEO43556 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.47□□□□□ -2.01
SGCEO43556 AC024153.1-201ENST00000603103 365 ntBASIC2.47□□□□□ -2.01
SGCEO43556 DUXAP3-201ENST00000603616 594 ntBASIC2.47□□□□□ -2.01
SGCEO43556 KATNBL1P5-201ENST00000605015 517 ntBASIC2.47□□□□□ -2.01
SGCEO43556 AL355493.4-201ENST00000618530 292 ntBASIC2.47□□□□□ -2.01
SGCEO43556 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.47□□□□□ -2.01
SGCEO43556 AC103798.2-201ENST00000624292 632 ntBASIC2.47□□□□□ -2.01
SGCEO43556 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SGCEO43556 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SGCEO43556 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SGCEO43556 AC008568.2-201ENST00000623862 2313 ntBASIC2.47□□□□□ -2.01
SGCEO43556 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SGCEO43556 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SGCEO43556 AC092593.1-201ENST00000515413 1815 ntBASIC2.47□□□□□ -2.01
SGCEO43556 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.46□□□□□ -2.01
SGCEO43556 TPTE2P4-201ENST00000258589 1605 ntBASIC2.46□□□□□ -2.02
SGCEO43556 MIR26A1-201ENST00000362205 77 ntBASIC2.46□□□□□ -2.02
SGCEO43556 RNU6-1155P-201ENST00000363554 107 ntBASIC2.46□□□□□ -2.02
SGCEO43556 SNORA25.6-201ENST00000364121 118 ntBASIC2.46□□□□□ -2.02
SGCEO43556 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SGCEO43556 SNORA48.5-201ENST00000391143 135 ntBASIC2.46□□□□□ -2.02
SGCEO43556 ANAPC10P1-201ENST00000395991 556 ntBASIC2.46□□□□□ -2.02
SGCEO43556 AL355615.1-201ENST00000406187 641 ntBASIC2.46□□□□□ -2.02
SGCEO43556 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.46□□□□□ -2.02
SGCEO43556 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.46□□□□□ -2.02
SGCEO43556 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.46□□□□□ -2.02
SGCEO43556 AC006946.1-201ENST00000429106 328 ntBASIC2.46□□□□□ -2.02
SGCEO43556 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.46□□□□□ -2.02
SGCEO43556 ZFAND6P1-201ENST00000434138 605 ntBASIC2.46□□□□□ -2.02
SGCEO43556 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.46□□□□□ -2.02
SGCEO43556 RPS29P6-201ENST00000438196 145 ntBASIC2.46□□□□□ -2.02
SGCEO43556 AL513043.1-201ENST00000439124 535 ntBASIC2.46□□□□□ -2.02
SGCEO43556 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.46□□□□□ -2.02
SGCEO43556 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.46□□□□□ -2.02
SGCEO43556 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.46□□□□□ -2.02
SGCEO43556 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.46□□□□□ -2.02
SGCEO43556 RPS29P26-201ENST00000477483 171 ntBASIC2.46□□□□□ -2.02
SGCEO43556 RN7SL297P-201ENST00000483161 293 ntBASIC2.46□□□□□ -2.02
SGCEO43556 RPL21P47-201ENST00000483696 477 ntBASIC2.46□□□□□ -2.02
SGCEO43556 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.46□□□□□ -2.02
SGCEO43556 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.46□□□□□ -2.02
SGCEO43556 AC117522.3-201ENST00000507974 584 ntBASIC2.46□□□□□ -2.02
SGCEO43556 SNORA9.3-201ENST00000516383 129 ntBASIC2.46□□□□□ -2.02
SGCEO43556 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.46□□□□□ -2.02
SGCEO43556 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SGCEO43556 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.46□□□□□ -2.02
SGCEO43556 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.46□□□□□ -2.02
SGCEO43556 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.46□□□□□ -2.02
SGCEO43556 NIFKP8-201ENST00000560500 874 ntBASIC2.46□□□□□ -2.02
SGCEO43556 MIR3605-201ENST00000583214 100 ntBASIC2.46□□□□□ -2.02
SGCEO43556 ZNF861P-201ENST00000588126 639 ntBASIC2.46□□□□□ -2.02
SGCEO43556 AC040174.2-201ENST00000602701 465 ntBASIC2.46□□□□□ -2.02
SGCEO43556 AL137843.1-201ENST00000605078 385 ntBASIC2.46□□□□□ -2.02
SGCEO43556 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.46□□□□□ -2.02
SGCEO43556 ZNF271P-202ENST00000465539 1970 ntBASIC2.46□□□□□ -2.02
SGCEO43556 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.46□□□□□ -2.02
SGCEO43556 AC008669.1-201ENST00000565823 2178 ntBASIC2.46□□□□□ -2.02
SGCEO43556 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SGCEO43556 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SGCEO43556 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.45□□□□□ -2.02
SGCEO43556 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SGCEO43556 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.45□□□□□ -2.02
SGCEO43556 RNU6-251P-201ENST00000363235 104 ntBASIC2.45□□□□□ -2.02
SGCEO43556 RNA5SP387-201ENST00000364226 106 ntBASIC2.45□□□□□ -2.02
SGCEO43556 SNORA70.4-201ENST00000365509 134 ntBASIC2.45□□□□□ -2.02
SGCEO43556 RNU6-1197P-201ENST00000391183 107 ntBASIC2.45□□□□□ -2.02
SGCEO43556 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.45□□□□□ -2.02
SGCEO43556 AC005345.1-201ENST00000431868 217 ntBASIC2.45□□□□□ -2.02
SGCEO43556 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
SGCEO43556 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.45□□□□□ -2.02
SGCEO43556 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.45□□□□□ -2.02
SGCEO43556 AC104164.3-201ENST00000467363 1258 ntBASIC2.45□□□□□ -2.02
SGCEO43556 AC003982.1-202ENST00000469928 248 ntBASIC2.45□□□□□ -2.02
SGCEO43556 AC048346.1-201ENST00000510247 144 ntBASIC2.45□□□□□ -2.02
SGCEO43556 AC010625.1-201ENST00000511296 403 ntBASIC2.45□□□□□ -2.02
SGCEO43556 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.45□□□□□ -2.02
SGCEO43556 RNU6-751P-201ENST00000516382 101 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms