Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
O00370 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
O00370 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
O00370 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
O00370 SGO1P2-201ENST00000429458 1589 ntBASIC3.56□□□□□ -1.84
O00370 MTCO1P23-201ENST00000415223 1526 ntBASIC3.56□□□□□ -1.84
O00370 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
O00370 GDI2P1-201ENST00000429312 1336 ntBASIC3.56□□□□□ -1.84
O00370 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
O00370 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
O00370 SNORD113-6-201ENST00000363345 75 ntBASIC3.56□□□□□ -1.84
O00370 HMGB3P23-201ENST00000414981 585 ntBASIC3.56□□□□□ -1.84
O00370 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.56□□□□□ -1.84
O00370 AL022400.1-201ENST00000423946 935 ntBASIC3.56□□□□□ -1.84
O00370 AC092447.3-201ENST00000426027 686 ntBASIC3.56□□□□□ -1.84
O00370 AC097713.2-201ENST00000430199 356 ntBASIC3.56□□□□□ -1.84
O00370 RABEPKP1-201ENST00000440529 1026 ntBASIC3.56□□□□□ -1.84
O00370 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.56□□□□□ -1.84
O00370 PRDX3P3-201ENST00000447765 522 ntBASIC3.56□□□□□ -1.84
O00370 CYCSP35-201ENST00000451978 304 ntBASIC3.56□□□□□ -1.84
O00370 TRGVB-201ENST00000453257 471 ntBASIC3.56□□□□□ -1.84
O00370 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.56□□□□□ -1.84
O00370 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.56□□□□□ -1.84
O00370 AC026410.2-201ENST00000460281 156 ntBASIC3.56□□□□□ -1.84
O00370 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.56□□□□□ -1.84
O00370 FAM172BP-201ENST00000487497 1089 ntBASIC3.56□□□□□ -1.84
O00370 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
O00370 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.56□□□□□ -1.84
O00370 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.56□□□□□ -1.84
O00370 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.56□□□□□ -1.84
O00370 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.56□□□□□ -1.84
O00370 SNORA64.4-201ENST00000516632 81 ntBASIC3.56□□□□□ -1.84
O00370 RNA5SP380-201ENST00000517190 98 ntBASIC3.56□□□□□ -1.84
O00370 AC105185.1-201ENST00000518705 535 ntBASIC3.56□□□□□ -1.84
O00370 DUXAP2-201ENST00000519198 589 ntBASIC3.56□□□□□ -1.84
O00370 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
O00370 AL163153.1-201ENST00000554223 283 ntBASIC3.56□□□□□ -1.84
O00370 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.56□□□□□ -1.84
O00370 AC087481.2-201ENST00000565492 330 ntBASIC3.56□□□□□ -1.84
O00370 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.56□□□□□ -1.84
O00370 MIR4637-201ENST00000582405 84 ntBASIC3.56□□□□□ -1.84
O00370 BNIP3P24-201ENST00000593398 557 ntBASIC3.56□□□□□ -1.84
O00370 AC006254.3-201ENST00000603353 884 ntBASIC3.56□□□□□ -1.84
O00370 AC069304.2-201ENST00000605154 435 ntBASIC3.56□□□□□ -1.84
O00370 AL592221.1-201ENST00000605266 382 ntBASIC3.56□□□□□ -1.84
O00370 AL136981.2-201ENST00000617319 734 ntBASIC3.56□□□□□ -1.84
O00370 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
O00370 AC079228.1-201ENST00000624774 1049 ntBASIC3.56□□□□□ -1.84
O00370 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.56□□□□□ -1.84
O00370 AC017071.1-201ENST00000564407 2204 ntBASIC3.56□□□□□ -1.84
O00370 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
O00370 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.55□□□□□ -1.84
O00370 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
O00370 AP000526.1-201ENST00000603308 1388 ntBASIC3.55□□□□□ -1.84
O00370 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.55□□□□□ -1.84
O00370 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
O00370 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.55□□□□□ -1.84
O00370 SNORA63.1-201ENST00000362493 131 ntBASIC3.55□□□□□ -1.84
O00370 SNORD46.1-201ENST00000364139 104 ntBASIC3.55□□□□□ -1.84
O00370 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.55□□□□□ -1.84
O00370 AL590084.2-201ENST00000401481 382 ntBASIC3.55□□□□□ -1.84
O00370 DHFRP6-201ENST00000401776 268 ntBASIC3.55□□□□□ -1.84
O00370 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.55□□□□□ -1.84
O00370 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.55□□□□□ -1.84
O00370 RPL7P34-201ENST00000433316 712 ntBASIC3.55□□□□□ -1.84
O00370 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.55□□□□□ -1.84
O00370 AC005019.1-201ENST00000436455 431 ntBASIC3.55□□□□□ -1.84
O00370 RSL24D1P3-201ENST00000449255 495 ntBASIC3.55□□□□□ -1.84
O00370 AC005297.2-201ENST00000450430 606 ntBASIC3.55□□□□□ -1.84
O00370 MEMO1P3-201ENST00000459811 302 ntBASIC3.55□□□□□ -1.84
O00370 KCTD9P5-201ENST00000504141 1170 ntBASIC3.55□□□□□ -1.84
O00370 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.55□□□□□ -1.84
O00370 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
O00370 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
O00370 UBE2NP1-201ENST00000545592 458 ntBASIC3.55□□□□□ -1.84
O00370 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.55□□□□□ -1.84
O00370 AC126177.3-201ENST00000551839 688 ntBASIC3.55□□□□□ -1.84
O00370 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.55□□□□□ -1.84
O00370 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.55□□□□□ -1.84
O00370 AL845331.3-202ENST00000562856 261 ntBASIC3.55□□□□□ -1.84
O00370 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.55□□□□□ -1.84
O00370 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.55□□□□□ -1.84
O00370 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.55□□□□□ -1.84
O00370 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.55□□□□□ -1.84
O00370 CLIC4P2-201ENST00000601934 717 ntBASIC3.55□□□□□ -1.84
O00370 MIR7975-201ENST00000619350 68 ntBASIC3.55□□□□□ -1.84
O00370 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.55□□□□□ -1.84
O00370 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
O00370 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
O00370 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
O00370 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
O00370 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
O00370 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.54□□□□□ -1.84
O00370 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
O00370 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
O00370 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.54□□□□□ -1.84
O00370 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.54□□□□□ -1.84
O00370 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
O00370 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
O00370 MTND5P27-201ENST00000428871 1720 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms