Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MTATP6P4-201ENST00000427725 675 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 HSPD1P21-201ENST00000436541 245 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC28A1O00337 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC28A1O00337 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC28A1O00337 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.17□□□□□ -1.9
SLC28A1O00337 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC28A1O00337 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC28A1O00337 MTND1P31-201ENST00000449206 961 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC28A1O00337 AC091564.1-201ENST00000464563 479 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SLC28A1O00337 AC091951.3-201ENST00000504093 246 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC28A1O00337 AC104090.1-201ENST00000506341 1171 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AC093281.2-201ENST00000510153 597 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AC024589.1-201ENST00000512207 263 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC28A1O00337 RNU6-415P-201ENST00000516252 97 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 RPL12P22-201ENST00000519073 490 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 IGHV3-76-201ENST00000522465 295 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 FAM60DP-201ENST00000524174 632 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AC055876.1-202ENST00000567053 138 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC28A1O00337 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC28A1O00337 AL353997.4-201ENST00000586196 166 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AC093227.2-201ENST00000589357 285 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC28A1O00337 AL133507.1-201ENST00000605269 557 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AC112220.3-201ENST00000605502 502 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AL591516.1-201ENST00000611326 274 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AL050303.3-201ENST00000613704 284 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AC002076.2-201ENST00000617362 122 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AL731566.2-201ENST00000618971 317 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC28A1O00337 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SLC28A1O00337 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC28A1O00337 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SLC28A1O00337 AC090740.1-201ENST00000623193 2262 ntBASIC3.17□□□□□ -1.9
SLC28A1O00337 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SLC28A1O00337 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SLC28A1O00337 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SLC28A1O00337 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC28A1O00337 RNA5SP124-201ENST00000362739 110 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 RNU6-97P-201ENST00000363387 104 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SLC28A1O00337 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SLC28A1O00337 MIR513B-201ENST00000385136 84 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 MIR493-201ENST00000385254 89 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SLC28A1O00337 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SLC28A1O00337 ANAPC10P1-201ENST00000395991 556 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC28A1O00337 HMGB1P49-201ENST00000418882 569 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC28A1O00337 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC28A1O00337 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC28A1O00337 EEF1E1P1-201ENST00000446998 430 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 AL592447.1-201ENST00000447592 540 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC28A1O00337 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC28A1O00337 RNA5SP310-201ENST00000459084 116 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
SLC28A1O00337 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC28A1O00337 AC114967.1-201ENST00000504890 259 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.16□□□□□ -1.9
SLC28A1O00337 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC28A1O00337 AC026801.2-201ENST00000515352 425 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 SNORA70.16-201ENST00000516390 95 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 AC068657.1-201ENST00000520807 306 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC28A1O00337 MTCO2P15-201ENST00000532655 656 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC28A1O00337 AL163153.1-201ENST00000554223 283 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC28A1O00337 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC28A1O00337 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC28A1O00337 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC28A1O00337 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC28A1O00337 AL020997.2-201ENST00000602607 184 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC28A1O00337 AC091903.1-201ENST00000624322 454 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 AC079228.1-201ENST00000624774 1049 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 AL034408.1-202ENST00000636088 415 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
SLC28A1O00337 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SLC28A1O00337 AC118273.1-201ENST00000525324 3006 ntBASIC3.16□□□□□ -1.9
SLC28A1O00337 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SLC28A1O00337 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.15□□□□□ -1.9
SLC28A1O00337 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SLC28A1O00337 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
SLC28A1O00337 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SLC28A1O00337 DEFB108F-201ENST00000344638 222 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 RNU1-70P-201ENST00000362618 164 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 RNU6-289P-201ENST00000364093 107 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 SNORA4.1-201ENST00000364263 144 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 RNA5SP479-201ENST00000364858 117 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 RNU6-359P-201ENST00000365466 108 ntBASIC3.15□□□□□ -1.91
SLC28A1O00337 RNU6-83P-201ENST00000384568 112 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms