Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HMGN2P16-201ENST00000456802 261 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 RPL21P104-201ENST00000464143 478 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AC004263.1-201ENST00000479327 332 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AP001025.2-201ENST00000490908 477 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AC098862.1-201ENST00000504991 413 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 SNORA31.8-201ENST00000516327 108 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AC034268.2-201ENST00000571784 482 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 ISCA1P3-201ENST00000577104 373 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 KLKP1-201ENST00000595979 403 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AC021171.1-201ENST00000603137 706 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AC006254.3-201ENST00000603353 884 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AC072039.2-201ENST00000608883 439 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 MIR7975-201ENST00000619350 68 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AL031667.3-201ENST00000620124 655 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 AC007671.2-201ENST00000637344 619 ntBASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.27□□□□□ -1.89
NPIPA3F8WFD2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 RNVU1-14-201ENST00000384770 164 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 RNU6-882P-201ENST00000391025 103 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AL590103.1-201ENST00000434488 307 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 MTCO3P16-201ENST00000454456 754 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 ATG12P2-201ENST00000456830 416 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 RN7SL93P-201ENST00000463035 293 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC072039.1-201ENST00000477611 581 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC093809.1-201ENST00000509155 340 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 SNORA70.18-201ENST00000516696 98 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC026407.1-201ENST00000518369 204 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 RANP9-201ENST00000519957 271 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC103843.2-201ENST00000530523 682 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC136618.2-201ENST00000575091 400 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 BNIP3P23-201ENST00000599655 511 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AP000811.1-201ENST00000603803 651 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC011468.4-201ENST00000603942 409 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC018714.1-201ENST00000605028 208 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC097468.3-201ENST00000607956 456 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC103710.4-201ENST00000609301 899 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AL732618.1-201ENST00000623251 301 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 OR6C71P-202ENST00000641886 1107 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 AL732372.2-225ENST00000642124 456 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 PRO1804-201ENST00000623780 2050 ntBASIC3.26□□□□□ -1.89
NPIPA3F8WFD2 MTND5P1-201ENST00000445440 1375 ntBASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 AC138915.3-201ENST00000562908 1389 ntBASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 MTCO1P9-201ENST00000505577 1534 ntBASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 AL672167.1-206ENST00000356293 943 ntBASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 RNU1-18P-201ENST00000363062 164 ntBASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 RNU6-173P-201ENST00000364215 104 ntBASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 RNU6-853P-201ENST00000364306 107 ntBASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 Y_RNA.302-201ENST00000364997 102 ntBASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 MIR490-201ENST00000384865 128 ntBASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 MTCO1P17-201ENST00000411522 491 ntBASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.25□□□□□ -1.89
NPIPA3F8WFD2 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms