Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.47□□□□□ -2.01
RGPD3A6NKT7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.47□□□□□ -2.01
RGPD3A6NKT7 AC089999.1-201ENST00000460336 374 ntBASIC2.47□□□□□ -2.01
RGPD3A6NKT7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.47□□□□□ -2.01
RGPD3A6NKT7 AC090543.1-201ENST00000492168 485 ntBASIC2.47□□□□□ -2.01
RGPD3A6NKT7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.47□□□□□ -2.01
RGPD3A6NKT7 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.47□□□□□ -2.01
RGPD3A6NKT7 MTND5P4-201ENST00000514978 288 ntBASIC2.47□□□□□ -2.01
RGPD3A6NKT7 RNU2-58P-201ENST00000516403 183 ntBASIC2.47□□□□□ -2.01
RGPD3A6NKT7 SNORA25.15-201ENST00000516487 89 ntBASIC2.47□□□□□ -2.01
RGPD3A6NKT7 RNU6-250P-201ENST00000516958 103 ntBASIC2.47□□□□□ -2.01
RGPD3A6NKT7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.47□□□□□ -2.01
RGPD3A6NKT7 PSMA6P4-201ENST00000603247 718 ntBASIC2.47□□□□□ -2.01
RGPD3A6NKT7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.47□□□□□ -2.01
RGPD3A6NKT7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.47□□□□□ -2.01
RGPD3A6NKT7 MIR591-201ENST00000385290 95 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 SDR42E1P3-201ENST00000438345 502 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 Z73417.1-201ENST00000447373 778 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 TBCAP3-201ENST00000512475 312 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 AP001542.2-201ENST00000593141 364 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 AL139811.1-201ENST00000424779 2299 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 AL137159.1-201ENST00000452808 512 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 AL445669.2-201ENST00000454425 421 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 AC011352.3-201ENST00000505162 593 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 SMARCE1P4-201ENST00000523647 241 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 MIR4458-201ENST00000578872 75 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 MIR5002-201ENST00000584713 97 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 AL356575.1-201ENST00000603008 283 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 AP000787.2-201ENST00000604432 568 ntBASIC2.46□□□□□ -2.02
RGPD3A6NKT7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
RGPD3A6NKT7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RGPD3A6NKT7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.45□□□□□ -2.02
RGPD3A6NKT7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.45□□□□□ -2.02
RGPD3A6NKT7 RPS27P5-201ENST00000444247 244 ntBASIC2.45□□□□□ -2.02
RGPD3A6NKT7 BX322784.1-201ENST00000455793 1077 ntBASIC2.45□□□□□ -2.02
RGPD3A6NKT7 HMGB3P15-201ENST00000507326 574 ntBASIC2.45□□□□□ -2.02
RGPD3A6NKT7 AC117532.1-201ENST00000514638 323 ntBASIC2.45□□□□□ -2.02
RGPD3A6NKT7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.45□□□□□ -2.02
RGPD3A6NKT7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.45□□□□□ -2.02
RGPD3A6NKT7 MIR6504-201ENST00000613520 61 ntBASIC2.45□□□□□ -2.02
RGPD3A6NKT7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.45□□□□□ -2.02
RGPD3A6NKT7 KPNA2P1-201ENST00000458289 1591 ntBASIC2.45□□□□□ -2.02
RGPD3A6NKT7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
RGPD3A6NKT7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RGPD3A6NKT7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RGPD3A6NKT7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.44□□□□□ -2.02
RGPD3A6NKT7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.44□□□□□ -2.02
RGPD3A6NKT7 RPL21P2-201ENST00000440049 481 ntBASIC2.44□□□□□ -2.02
RGPD3A6NKT7 PTGES3P5-201ENST00000455109 434 ntBASIC2.44□□□□□ -2.02
RGPD3A6NKT7 MTND4LP22-201ENST00000508209 276 ntBASIC2.44□□□□□ -2.02
RGPD3A6NKT7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.44□□□□□ -2.02
RGPD3A6NKT7 HMGN2P28-201ENST00000606102 262 ntBASIC2.44□□□□□ -2.02
RGPD3A6NKT7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.44□□□□□ -2.02
RGPD3A6NKT7 RMST_2.1-201ENST00000617263 136 ntBASIC2.44□□□□□ -2.02
RGPD3A6NKT7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RGPD3A6NKT7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RGPD3A6NKT7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RGPD3A6NKT7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RGPD3A6NKT7 RNA5SP189-201ENST00000364920 115 ntBASIC2.44□□□□□ -2.02
RGPD3A6NKT7 RNU2-17P-201ENST00000410290 190 ntBASIC2.44□□□□□ -2.02
RGPD3A6NKT7 AC004965.1-201ENST00000413033 213 ntBASIC2.44□□□□□ -2.02
RGPD3A6NKT7 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.44□□□□□ -2.02
RGPD3A6NKT7 CASP3P1-201ENST00000446037 609 ntBASIC2.44□□□□□ -2.02
RGPD3A6NKT7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.44□□□□□ -2.02
RGPD3A6NKT7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.44□□□□□ -2.02
RGPD3A6NKT7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.44□□□□□ -2.02
RGPD3A6NKT7 ZNF271P-202ENST00000465539 1970 ntBASIC2.43□□□□□ -2.02
RGPD3A6NKT7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.43□□□□□ -2.02
RGPD3A6NKT7 RNU6-707P-201ENST00000364647 95 ntBASIC2.43□□□□□ -2.02
RGPD3A6NKT7 RNU1-57P-201ENST00000384491 166 ntBASIC2.43□□□□□ -2.02
RGPD3A6NKT7 RNA5SP181-201ENST00000410246 98 ntBASIC2.43□□□□□ -2.02
RGPD3A6NKT7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.43□□□□□ -2.02
RGPD3A6NKT7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.43□□□□□ -2.02
RGPD3A6NKT7 MTCO3P30-201ENST00000426425 670 ntBASIC2.43□□□□□ -2.02
RGPD3A6NKT7 AC087190.1-201ENST00000484462 480 ntBASIC2.43□□□□□ -2.02
RGPD3A6NKT7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.43□□□□□ -2.02
RGPD3A6NKT7 AC092436.3-201ENST00000511788 257 ntBASIC2.43□□□□□ -2.02
RGPD3A6NKT7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.43□□□□□ -2.02
RGPD3A6NKT7 AC060766.3-201ENST00000591442 263 ntBASIC2.43□□□□□ -2.02
RGPD3A6NKT7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.43□□□□□ -2.02
RGPD3A6NKT7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RGPD3A6NKT7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
RGPD3A6NKT7 AL118496.1-201ENST00000440201 1812 ntBASIC2.42□□□□□ -2.02
RGPD3A6NKT7 Y_RNA.112-201ENST00000363250 102 ntBASIC2.42□□□□□ -2.02
RGPD3A6NKT7 AC009237.2-201ENST00000421358 284 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms