Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RNA5SP337-201ENST00000517007 109 ntBASIC1.84□□□□□ -2.11
CNOT1A5YKK6 IGHV3-76-201ENST00000522465 295 ntBASIC1.84□□□□□ -2.11
CNOT1A5YKK6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.84□□□□□ -2.11
CNOT1A5YKK6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.84□□□□□ -2.11
CNOT1A5YKK6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CNOT1A5YKK6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CNOT1A5YKK6 Y_RNA.458-201ENST00000384240 102 ntBASIC1.84□□□□□ -2.12
CNOT1A5YKK6 AC106901.1-201ENST00000425086 698 ntBASIC1.84□□□□□ -2.12
CNOT1A5YKK6 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.84□□□□□ -2.12
CNOT1A5YKK6 HMGB3P10-201ENST00000434734 572 ntBASIC1.84□□□□□ -2.12
CNOT1A5YKK6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.84□□□□□ -2.12
CNOT1A5YKK6 RPL21P18-201ENST00000469899 480 ntBASIC1.84□□□□□ -2.12
CNOT1A5YKK6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.84□□□□□ -2.12
CNOT1A5YKK6 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.84□□□□□ -2.12
CNOT1A5YKK6 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC1.84□□□□□ -2.12
CNOT1A5YKK6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.84□□□□□ -2.12
CNOT1A5YKK6 SNRPGP19-201ENST00000603826 189 ntBASIC1.84□□□□□ -2.12
CNOT1A5YKK6 AC073387.2-201ENST00000604797 784 ntBASIC1.84□□□□□ -2.12
CNOT1A5YKK6 AC131902.3-201ENST00000611767 581 ntBASIC1.84□□□□□ -2.12
CNOT1A5YKK6 RPL23AP61-201ENST00000623642 466 ntBASIC1.84□□□□□ -2.12
CNOT1A5YKK6 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.84□□□□□ -2.12
CNOT1A5YKK6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 MIR625-201ENST00000385047 85 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 RNU2-32P-201ENST00000411193 191 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 AL513331.1-201ENST00000411908 397 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 HMGB1P11-201ENST00000413899 637 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 RPS7P2-201ENST00000435134 607 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 RNA5SP309-201ENST00000516670 106 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 MYL12BP1-201ENST00000569826 507 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 NF1P5-201ENST00000588287 448 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 SNORA50A-202ENST00000629536 136 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 AC092435.3-201ENST00000565538 3654 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 U3.15-201ENST00000365398 212 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 SNORD114-22-201ENST00000365423 72 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 AC004965.1-201ENST00000413033 213 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 VN1R31P-201ENST00000417498 730 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 AC005005.2-201ENST00000420779 380 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 RNA5SP476-201ENST00000516613 103 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 MIR3186-201ENST00000577404 85 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.83□□□□□ -2.12
CNOT1A5YKK6 LRRC77P-213ENST00000637727 880 ntBASIC1.83□□□□□ -2.12
CNOT1A5YKK6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
CNOT1A5YKK6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.82□□□□□ -2.12
CNOT1A5YKK6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CNOT1A5YKK6 AL022400.1-201ENST00000423946 935 ntBASIC1.82□□□□□ -2.12
CNOT1A5YKK6 RPL7P46-201ENST00000425129 740 ntBASIC1.82□□□□□ -2.12
CNOT1A5YKK6 ATP5F1P1-201ENST00000433775 569 ntBASIC1.82□□□□□ -2.12
CNOT1A5YKK6 USP9YP8-201ENST00000441913 500 ntBASIC1.82□□□□□ -2.12
CNOT1A5YKK6 TRAV31-201ENST00000502780 342 ntBASIC1.82□□□□□ -2.12
CNOT1A5YKK6 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.82□□□□□ -2.12
CNOT1A5YKK6 AC087441.2-201ENST00000529141 262 ntBASIC1.82□□□□□ -2.12
CNOT1A5YKK6 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.82□□□□□ -2.12
CNOT1A5YKK6 AL645944.1-201ENST00000603857 493 ntBASIC1.82□□□□□ -2.12
CNOT1A5YKK6 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
CNOT1A5YKK6 MAPK10-266ENST00000641066 6555 ntBASIC1.82□□□□□ -2.12
CNOT1A5YKK6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.82□□□□□ -2.12
CNOT1A5YKK6 OR5H15-201ENST00000383696 930 ntBASIC1.81□□□□□ -2.12
CNOT1A5YKK6 AL035405.1-201ENST00000400795 710 ntBASIC1.81□□□□□ -2.12
CNOT1A5YKK6 SNORD88.1-201ENST00000408684 91 ntBASIC1.81□□□□□ -2.12
CNOT1A5YKK6 AC009302.1-201ENST00000417147 390 ntBASIC1.81□□□□□ -2.12
CNOT1A5YKK6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.81□□□□□ -2.12
CNOT1A5YKK6 AC092155.2-201ENST00000454675 477 ntBASIC1.81□□□□□ -2.12
CNOT1A5YKK6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CNOT1A5YKK6 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.81□□□□□ -2.12
CNOT1A5YKK6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.81□□□□□ -2.12
CNOT1A5YKK6 AC007687.1-201ENST00000602704 304 ntBASIC1.81□□□□□ -2.12
CNOT1A5YKK6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.81□□□□□ -2.12
CNOT1A5YKK6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CNOT1A5YKK6 RNU6-37P-201ENST00000362692 107 ntBASIC1.81□□□□□ -2.12
CNOT1A5YKK6 RNU6-11P-201ENST00000364234 107 ntBASIC1.81□□□□□ -2.12
CNOT1A5YKK6 SNORA51.12-201ENST00000384448 134 ntBASIC1.81□□□□□ -2.12
CNOT1A5YKK6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.81□□□□□ -2.12
CNOT1A5YKK6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.81□□□□□ -2.12
CNOT1A5YKK6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.81□□□□□ -2.12
CNOT1A5YKK6 AC002546.1-201ENST00000588041 2504 ntBASIC1.81□□□□□ -2.12
CNOT1A5YKK6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CNOT1A5YKK6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.8□□□□□ -2.12
CNOT1A5YKK6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CNOT1A5YKK6 Z98749.2-208ENST00000381646 500 ntBASIC1.8□□□□□ -2.12
CNOT1A5YKK6 RPL5P19-201ENST00000404228 893 ntBASIC1.8□□□□□ -2.12
CNOT1A5YKK6 RNA5SP181-201ENST00000410246 98 ntBASIC1.8□□□□□ -2.12
CNOT1A5YKK6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.8□□□□□ -2.12
CNOT1A5YKK6 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC1.8□□□□□ -2.12
CNOT1A5YKK6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
CNOT1A5YKK6 AL138787.1-202ENST00000437804 898 ntBASIC1.8□□□□□ -2.12
CNOT1A5YKK6 AC009474.2-201ENST00000451383 136 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms