Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC068880.5-201ENST00000624331 290 ntBASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
HLA-DRB4X5D2U9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 AL590762.3-201ENST00000436372 640 ntBASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 AL031659.1-201ENST00000447075 539 ntBASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 AC011753.1-201ENST00000451001 220 ntBASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 AC133134.1-201ENST00000466800 359 ntBASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 RNF138P1-201ENST00000502765 546 ntBASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 AC114322.1-201ENST00000506771 926 ntBASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 AC113155.1-201ENST00000511141 769 ntBASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 OR5BM1P-201ENST00000512021 366 ntBASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 AC117525.1-201ENST00000515228 503 ntBASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 RNA5SP320-201ENST00000516263 124 ntBASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.84□□□□□ -2.11
HLA-DRB4X5D2U9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
HLA-DRB4X5D2U9 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HLA-DRB4X5D2U9 AC005336.3-201ENST00000623833 2679 ntBASIC1.84□□□□□ -2.12
HLA-DRB4X5D2U9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 RNU6-1249P-201ENST00000363237 111 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 RNA5SP37-201ENST00000365420 130 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 SNORA41-201ENST00000384675 132 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 RNU6-1072P-201ENST00000384703 107 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 RNU6-443P-201ENST00000384780 107 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 MTND1P23-201ENST00000416931 372 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 TMEM167AP1-201ENST00000423409 219 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 YWHAZP8-201ENST00000436935 731 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AP003467.2-201ENST00000520175 319 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 OR5AK3P-201ENST00000527486 1297 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AC121758.2-201ENST00000553271 193 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AC106782.4-201ENST00000568264 210 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AC011471.1-201ENST00000585766 187 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AC007621.1-201ENST00000604544 437 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AC106900.2-201ENST00000604994 317 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 MIR6817-201ENST00000615588 66 ntBASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DRB4X5D2U9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AL512646.1-201ENST00000269395 1077 ntBASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 DSTNP4-201ENST00000399472 474 ntBASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 RPS4XP8-201ENST00000402039 771 ntBASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AL122016.1-201ENST00000403365 367 ntBASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AC006548.1-201ENST00000427470 102 ntBASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AC098826.1-201ENST00000433943 471 ntBASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 DPPA3P1-201ENST00000448050 469 ntBASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AC108938.1-201ENST00000451204 136 ntBASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AC010099.1-201ENST00000455434 375 ntBASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 RPS3P1-201ENST00000456781 192 ntBASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 MRPL42P6-201ENST00000486397 371 ntBASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AC096751.1-202ENST00000502691 1067 ntBASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.82□□□□□ -2.12
HLA-DRB4X5D2U9 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms