Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL4A3BPQ9Y5P4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 OR1S2-201ENST00000302592 978 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 RNU5A-6P-201ENST00000384136 116 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 SNORA70C-201ENST00000384538 135 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC110754.1-201ENST00000399740 601 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC127391.1-201ENST00000411737 98 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 RPS23P10-201ENST00000416185 486 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 EIF4EP1-201ENST00000422311 642 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC008850.1-201ENST00000427546 362 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 ISCA1P6-201ENST00000427740 390 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AL672296.1-201ENST00000427780 2158 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 USP12PX-201ENST00000432383 1057 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AL031667.1-201ENST00000440222 725 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 RPL23AP81-201ENST00000455252 467 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 HSPE1P6-201ENST00000479457 291 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AL592156.1-201ENST00000508758 304 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 RN7SKP289-201ENST00000517244 295 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AL391156.1-201ENST00000554965 554 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 TVP23BP1-201ENST00000557500 617 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AL161734.1-201ENST00000609720 557 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC122108.2-201ENST00000611946 526 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC023043.4-201ENST00000612081 449 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC005332.10-201ENST00000612725 619 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AL133173.2-201ENST00000614270 90 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC091834.1-201ENST00000614543 472 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC006338.1-201ENST00000618453 749 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC068831.8-201ENST00000620171 435 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AL445363.3-201ENST00000623080 671 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 FRG1KP-201ENST00000623592 341 ntBASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A3BPQ9Y5P4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 RNU5E-1-201ENST00000362477 120 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 RNU1-14P-201ENST00000362759 152 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 DEFB109C-201ENST00000382575 264 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 DEFB109B-201ENST00000382656 264 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 RNA5SP36-201ENST00000410197 133 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AL161631.1-201ENST00000417933 486 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 ELOCP4-201ENST00000420090 333 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AL589823.1-201ENST00000429577 183 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 RPS24P1-201ENST00000438550 371 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC016696.1-201ENST00000446949 318 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 TPT1P7-201ENST00000458300 517 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 RPL7P19-201ENST00000469948 618 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC007537.2-201ENST00000472093 511 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 RPS27AP1-201ENST00000475545 471 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC068305.1-201ENST00000497406 726 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 RNA5SP519-201ENST00000516480 119 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 RNA5SP73-201ENST00000516744 108 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 RNA5SP337-201ENST00000517007 109 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 RNU6-430P-201ENST00000517078 107 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 HMGB1P19-201ENST00000517578 577 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 MTCO2P4-201ENST00000517968 247 ntBASIC4.75□□□□□ -1.65
COL4A3BPQ9Y5P4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms