Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 CUL1P1-201ENST00000509510 2425 ntBASIC3.46□□□□□ -1.85
PCDHGA1Q9Y5H4 AC092326.2-201ENST00000624772 1561 ntBASIC3.46□□□□□ -1.85
PCDHGA1Q9Y5H4 MTND5P24-201ENST00000438892 1767 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 TAB3P1-202ENST00000452645 1634 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 FRG1BP-201ENST00000278882 761 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 SNORA48.8-201ENST00000391324 134 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 RN7SKP111-201ENST00000410349 271 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 RPS24P7-201ENST00000416921 246 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 CCDC58P2-201ENST00000417131 366 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 YPEL5P1-201ENST00000419731 367 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 SDCBPP1-201ENST00000440192 890 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC099563.1-201ENST00000456086 418 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 RPL7P18-201ENST00000478965 734 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 XKRY-201ENST00000510392 1100 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC010587.2-201ENST00000511727 448 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 RNU5A-4P-201ENST00000516588 111 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 SUMO2P20-201ENST00000520803 283 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC024224.1-201ENST00000538284 609 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC234772.3-201ENST00000602277 528 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AL022099.1-201ENST00000604551 712 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC026790.2-201ENST00000606282 430 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC008121.2-201ENST00000614647 523 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC068831.7-201ENST00000616954 363 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC011330.2-201ENST00000621680 635 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AL353748.2-201ENST00000622148 471 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 ZNF807-201ENST00000328088 1707 ntBASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHGA1Q9Y5H4 AL513185.3-201ENST00000433335 1300 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 OR5BR1P-201ENST00000524992 1330 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 MAPK10-362ENST00000641864 4484 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 RNU4-35P-201ENST00000362588 141 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 SNORA48.5-201ENST00000391143 135 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AL031679.1-201ENST00000400616 525 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 MIR1284-201ENST00000408337 120 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 MIR1290-201ENST00000408735 78 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AC109780.2-201ENST00000413467 845 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 RNA5SP208-201ENST00000516156 78 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AC087465.1-201ENST00000560574 245 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AC009097.3-201ENST00000563557 1018 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 MIR4325-201ENST00000583049 90 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 VN1R78P-201ENST00000597393 564 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AC002076.2-201ENST00000617362 122 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AL357080.1-201ENST00000617394 239 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AP000484.1-201ENST00000620067 1252 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AL732618.1-201ENST00000623251 301 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AC231657.1-201ENST00000624313 397 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 AC008993.2-201ENST00000631744 806 ntBASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PCDHGA1Q9Y5H4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms