Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 RNU6-933P-201ENST00000384424 107 ntBASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 RNA5SP431-201ENST00000410312 120 ntBASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 AC074255.1-201ENST00000511259 501 ntBASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 RN7SL652P-201ENST00000577769 300 ntBASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 MIR548AC-201ENST00000585049 88 ntBASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 MIR7109-201ENST00000613748 65 ntBASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 RNY1P16-201ENST00000363063 111 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 RNU4-50P-201ENST00000364361 141 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 RNA5SP91-201ENST00000390902 119 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 RNU6-837P-201ENST00000391056 108 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 RNU6-712P-201ENST00000410558 100 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 RNU6-1023P-201ENST00000516137 106 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 RNU6-914P-201ENST00000516749 109 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 AC011853.1-201ENST00000518911 454 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 SNRPGP16-201ENST00000533275 226 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 HSPE1P20-201ENST00000538133 289 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 AC079905.1-201ENST00000549280 475 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 AC015720.2-201ENST00000567709 334 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 AC006600.1-201ENST00000572529 153 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 MIR3128-201ENST00000581957 66 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 VN1R91P-201ENST00000594377 169 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 AC068790.4-201ENST00000602474 263 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 SNORD91B-202ENST00000608459 222 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 IRF5P1-201ENST00000504852 2164 ntBASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA11Q9Y5H2 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 Y_RNA.214-201ENST00000364201 112 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 Y_RNA.222-201ENST00000364264 102 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 RNU1-136P-201ENST00000384181 164 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 SNORA70E-201ENST00000384492 135 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 SSXP9-201ENST00000417503 292 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 AC126120.1-201ENST00000431082 470 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 AC090804.1-201ENST00000448870 490 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 RPS23P2-201ENST00000463671 415 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 RPL39P38-201ENST00000467018 153 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 AC009120.1-201ENST00000493458 473 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 GLUD1P3-202ENST00000508551 200 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 MTND3P25-201ENST00000509243 135 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 SNORA25.11-201ENST00000515935 105 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 RPL23AP87-202ENST00000573039 466 ntBASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.56□□□□□ -1.52
PCDHGA11Q9Y5H2 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms