Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC011460.1-201ENST00000636268 1834 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 RNU6-1074P-201ENST00000383995 104 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 RNU6-1005P-201ENST00000384519 107 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 SNORA1.3-201ENST00000384676 136 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 RNA5SP252-201ENST00000391131 119 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 RPS4XP3-201ENST00000398541 413 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 CYCSP45-201ENST00000402289 315 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 RPS15AP38-201ENST00000413110 372 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 OR4K6P-201ENST00000416478 897 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 RPL23AP74-201ENST00000437246 471 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 MTND2P19-201ENST00000449129 1012 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 RPL30P14-201ENST00000482744 348 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 VPS26AP1-201ENST00000483197 979 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 PRELID3BP4-201ENST00000515476 571 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC103833.1-201ENST00000517442 172 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC090695.1-201ENST00000561269 1222 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC233266.2-201ENST00000567067 528 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC011471.1-201ENST00000585766 187 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 NUTF2P8-201ENST00000604593 363 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC106791.2-201ENST00000604680 391 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 BNIP3P4-201ENST00000604946 565 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AL133507.1-201ENST00000605269 557 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AP004247.3-201ENST00000608682 624 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 BX664608.1-201ENST00000610519 487 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC008083.4-201ENST00000615076 444 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AL353748.2-201ENST00000622148 471 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 AC098679.5-201ENST00000624394 571 ntBASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.34□□□□□ -2.03
HDGFL3Q9Y3E1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HDGFL3Q9Y3E1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 SNORD62.1-201ENST00000362541 86 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 SNORA5B-201ENST00000363786 132 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 SNORD56.5-201ENST00000364281 72 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 DEFA7P-201ENST00000382676 285 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 FO393413.1-201ENST00000402892 195 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 FAT1P1-201ENST00000406588 507 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 USP9YP20-201ENST00000419224 558 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 ARL5AP4-201ENST00000430731 512 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 ST13P20-201ENST00000447996 1065 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 RPS4XP6-201ENST00000477670 797 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 KC877373.1-201ENST00000479066 408 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AC004924.1-201ENST00000480160 781 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 MLLT10P2-201ENST00000506434 249 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AC009901.1-201ENST00000506703 541 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AC090136.1-201ENST00000520009 240 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 CKS1BP1-201ENST00000555221 240 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AP005205.1-201ENST00000563503 508 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 MIR4319-201ENST00000577285 85 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 GLUD1P4-201ENST00000590914 418 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AC106900.2-201ENST00000604994 317 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AL121594.5-201ENST00000631724 573 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 BX649567.1-201ENST00000642071 1134 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AL365361.1-201ENST00000566942 3481 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 AC111188.2-201ENST00000529697 1387 ntBASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HDGFL3Q9Y3E1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HDGFL3Q9Y3E1 AC062016.1-201ENST00000355719 319 ntBASIC2.32□□□□□ -2.04
HDGFL3Q9Y3E1 AC083799.1-201ENST00000366451 910 ntBASIC2.32□□□□□ -2.04
HDGFL3Q9Y3E1 MIR34A-201ENST00000385130 110 ntBASIC2.32□□□□□ -2.04
HDGFL3Q9Y3E1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms