Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC104986.1-201ENST00000517978 436 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AC060788.1-201ENST00000521318 469 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AC006362.1-201ENST00000567392 174 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 MIR4727-201ENST00000622232 55 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AC119674.1-207ENST00000641355 633 ntBASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CDK11AQ9UQ88 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 Y_RNA.559-201ENST00000384686 107 ntBASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 RNY3P10-201ENST00000384764 102 ntBASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 ARF4P3-201ENST00000397387 509 ntBASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 RPL32P34-201ENST00000486380 400 ntBASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 TMEM251P1-201ENST00000503717 318 ntBASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 RAC1P2-201ENST00000511164 579 ntBASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 AC012213.3-201ENST00000577199 777 ntBASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 AC112187.2-201ENST00000604345 283 ntBASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 AC025594.3-201ENST00000613068 790 ntBASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 RMST_9.1-201ENST00000619945 193 ntBASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 AC097504.1-201ENST00000515103 2415 ntBASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 PABPC1P9-201ENST00000426076 1612 ntBASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDK11AQ9UQ88 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC016769.3-201ENST00000396562 315 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 MIR320C1-201ENST00000408566 88 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 RAC1P3-201ENST00000416129 580 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 MTCO2P34-201ENST00000421994 607 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC097713.2-201ENST00000430199 356 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 LARP1BP3-201ENST00000437229 869 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 SNORA71B-202ENST00000439232 272 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 COX6CP12-201ENST00000446748 202 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC006480.1-201ENST00000449887 378 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 RPS20P24-201ENST00000457473 361 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 RNU7-136P-201ENST00000458819 69 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 RNA5SP269-201ENST00000459032 137 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC084198.1-201ENST00000477747 402 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 RPL23AP55-201ENST00000498163 452 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC021678.1-201ENST00000505195 936 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 SNORA70.14-201ENST00000516205 110 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC141257.3-201ENST00000572906 215 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC022146.1-201ENST00000595307 847 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC068790.5-201ENST00000602741 355 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC087752.4-201ENST00000605911 462 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC012531.5-201ENST00000611375 151 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AC006329.2-201ENST00000611491 394 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 CYP3A51P-201ENST00000633513 256 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 AL356473.1-201ENST00000406203 1408 ntBASIC5.8□□□□□ -1.48
CDK11AQ9UQ88 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AL365440.1-201ENST00000436135 2167 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 RPL23AP57-201ENST00000332361 466 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 RNA5SP424-201ENST00000390988 115 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 TOMM22P1-201ENST00000418578 312 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC006366.1-201ENST00000422002 759 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 RPS27AP14-201ENST00000422868 454 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AL589823.1-201ENST00000429577 183 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC073063.1-201ENST00000434352 607 ntBASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK11AQ9UQ88 AC017015.1-201ENST00000477387 286 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms