Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 ADAM5-202ENST00000399789 1942 ntBASIC4.34□□□□□ -1.71
CDC42EP3Q9UKI2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDC42EP3Q9UKI2 AC104964.3-201ENST00000606115 2860 ntBASIC4.34□□□□□ -1.72
CDC42EP3Q9UKI2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
CDC42EP3Q9UKI2 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 SDAD1P1-202ENST00000524156 2051 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 SNORD113-7-201ENST00000363762 77 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 RNU1-32P-201ENST00000363937 159 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 RNU6-1160P-201ENST00000384546 104 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 RNY4P36-201ENST00000391116 96 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 RN7SKP158-201ENST00000410453 326 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 RNU4-46P-201ENST00000410818 138 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AL591848.1-201ENST00000413092 322 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 GJA6P-201ENST00000415117 1042 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AC119751.6-201ENST00000416712 186 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 Z82205.1-201ENST00000428456 297 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 HMGB3P11-201ENST00000440127 604 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AC011753.3-201ENST00000443436 406 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AL591623.2-201ENST00000449978 222 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 HMGB3P21-201ENST00000452483 547 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 FGF7P3-201ENST00000454645 303 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AP000797.2-201ENST00000475768 606 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 RPL7P23-201ENST00000493874 747 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 Y_RNA.711-201ENST00000516993 102 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AC090136.1-201ENST00000520009 240 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 HMGN1P28-201ENST00000521340 364 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AC008033.2-201ENST00000542626 177 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 OR11H5P-201ENST00000554039 926 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 RN7SL290P-201ENST00000578661 300 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AC067852.4-201ENST00000590314 478 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AC006254.3-201ENST00000603353 884 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AP001330.4-201ENST00000604350 154 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AL080274.1-201ENST00000605565 220 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AC124303.1-201ENST00000605703 360 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AC015871.5-202ENST00000623252 701 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 MTND4LP32-201ENST00000636111 270 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 MAPK10-286ENST00000641208 8747 ntBASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP3Q9UKI2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AC000123.3-201ENST00000624029 4975 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 TPTE2P4-201ENST00000258589 1605 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AC090229.1-201ENST00000590983 1609 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 MAPK10-320ENST00000641462 6696 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 MTCO1P9-201ENST00000505577 1534 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 MIR369-201ENST00000362155 70 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 Y_RNA.202-201ENST00000364083 110 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 SNORA68.2-201ENST00000391263 128 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 RN7SKP159-201ENST00000410657 292 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AC016712.1-201ENST00000431088 378 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AL451139.1-201ENST00000434718 346 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AC092647.2-201ENST00000452998 253 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 RN7SL354P-201ENST00000469282 294 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AC092754.1-201ENST00000472975 479 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AC090096.1-201ENST00000489168 390 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AC104806.1-201ENST00000508720 308 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 Y_RNA.682-201ENST00000516457 100 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 RNU6-685P-201ENST00000517088 95 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AC012400.1-201ENST00000518452 381 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 AL121576.1-201ENST00000556055 276 ntBASIC4.32□□□□□ -1.72
CDC42EP3Q9UKI2 MTCYBP13-201ENST00000578634 1093 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms