Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 SNORA64.1-201ENST00000362600 132 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 RN7SKP124-201ENST00000364730 341 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 SNORA63.7-201ENST00000365579 123 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 Y_RNA.534-201ENST00000384599 112 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 RNA5SP91-201ENST00000390902 119 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 SYF2P2-201ENST00000417620 583 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AL662874.1-201ENST00000426065 230 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AL590399.2-201ENST00000427536 309 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 USP9YP16-201ENST00000430287 407 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 HSFY6P-201ENST00000445573 403 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AL360271.2-201ENST00000447710 161 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 USP9YP23-201ENST00000455085 407 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 RPL9P32-201ENST00000464118 620 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 RPS23P3-201ENST00000470993 430 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 OR2AO1P-201ENST00000476497 403 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AC012158.1-204ENST00000483430 465 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 RN7SL284P-201ENST00000498823 275 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 IGLV3-30-201ENST00000524362 298 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 SNORD84-203ENST00000584275 78 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AC025857.2-201ENST00000602711 238 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AC016727.2-201ENST00000603988 621 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 Z98751.3-201ENST00000604447 521 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 RNU6-85P-201ENST00000605989 107 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 SNORD91B-202ENST00000608459 222 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AL591516.1-201ENST00000611326 274 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AC034102.8-201ENST00000615146 484 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AC091812.1-201ENST00000432235 1948 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 AP004607.3-201ENST00000530354 3915 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AL138820.1-201ENST00000617901 5305 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AL592437.2-201ENST00000421655 2434 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AC004656.1-201ENST00000568479 4951 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 Y_RNA.151-201ENST00000363566 112 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 RHOT1P2-201ENST00000366423 333 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 RPL11P3-201ENST00000395256 523 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 U3.35-201ENST00000408405 208 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 RNU4-34P-201ENST00000410431 124 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 RN7SKP126-201ENST00000411143 300 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 RN7SKP17-201ENST00000411242 351 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 RNU6-607P-201ENST00000411283 108 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 RPS15AP6-201ENST00000420703 385 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 MTATP6P4-201ENST00000427725 675 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AL133396.1-201ENST00000432048 687 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AL589765.3-201ENST00000446084 462 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 IFNWP4-201ENST00000453148 294 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 RPL12P39-201ENST00000455456 496 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AC008571.1-201ENST00000467232 300 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AC011005.2-201ENST00000487324 359 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 RPS15AP34-201ENST00000487776 387 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 RPL22P13-201ENST00000493291 347 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 RPS4XP20-201ENST00000505751 772 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 RNU6-927P-201ENST00000516199 100 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AC008489.1-201ENST00000524271 483 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 MIR4489-201ENST00000578869 62 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AC060780.2-201ENST00000589047 198 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AC093227.2-201ENST00000589357 285 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 SNORD58B-201ENST00000607313 66 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AC107871.2-201ENST00000612894 502 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AL353748.2-201ENST00000622148 471 ntBASIC5.11□□□□□ -1.59
FOXD3Q9UJU5 AC138965.3-201ENST00000623875 498 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms