Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 RNVU1-3-201ENST00000364313 161 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AL122016.1-201ENST00000403365 367 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 RPL7P25-201ENST00000404151 721 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 RNU4-65P-201ENST00000410473 140 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 RN7SKP123-201ENST00000410732 291 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 MTCO3P12-201ENST00000416718 547 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 FNDC3CP-201ENST00000420795 1155 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 PTP4A1P7-201ENST00000423476 514 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 PTGES3P1-201ENST00000439531 483 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 VPS26AP1-201ENST00000483197 979 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 RPS3AP14-201ENST00000483907 780 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AC008427.1-201ENST00000503102 655 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 KLRA1P-201ENST00000503499 986 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 BOLA3P3-201ENST00000505182 232 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 RN7SKP282-201ENST00000516824 299 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 SNORA31.20-201ENST00000517111 133 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AC087897.1-201ENST00000550134 156 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AC093783.1-201ENST00000612976 329 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AC073968.1-201ENST00000618594 637 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AL590240.3-201ENST00000621416 943 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AC022079.1-201ENST00000621546 602 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AC068057.2-201ENST00000624047 895 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AC126544.2-201ENST00000625174 749 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 AC093908.1-201ENST00000623125 8092 ntBASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AL603865.2-201ENST00000401679 213 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AL133264.1-201ENST00000407157 562 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 USP9YP21-201ENST00000420603 432 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 COTL1P1-201ENST00000422309 375 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AC022018.1-201ENST00000430685 241 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AL645568.2-201ENST00000432815 1337 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AC004854.1-201ENST00000440356 349 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AL831737.1-201ENST00000441288 271 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 HMGB1P15-201ENST00000453854 435 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 PABPC1P3-201ENST00000469174 459 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AC010301.1-201ENST00000473936 355 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 OR2A20P-203ENST00000498397 1268 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AC084024.2-201ENST00000503480 791 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 SCARNA13-201ENST00000516672 275 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 RN7SKP272-201ENST00000516988 232 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AP001317.1-201ENST00000531194 960 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 MTCYBP27-201ENST00000555160 670 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AC034268.2-201ENST00000571784 482 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 LARP7P3-201ENST00000579888 337 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AL137843.1-201ENST00000605078 385 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AC013244.3-201ENST00000605614 388 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AL592148.2-201ENST00000612210 372 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AL157770.1-201ENST00000623049 439 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AL137790.1-201ENST00000634283 177 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 AL445984.1-201ENST00000637834 659 ntBASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP2Q9UDT6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 ANKRD36P1-201ENST00000344424 659 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 RNU6-989P-201ENST00000362756 107 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 BOLA3P4-201ENST00000418151 400 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AC092634.6-201ENST00000418558 192 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 MTCO2P23-201ENST00000425216 680 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AC092447.3-201ENST00000426027 686 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 MTATP6P26-201ENST00000445926 662 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 MTND1P31-201ENST00000449206 961 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AC068724.1-201ENST00000487100 792 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 DYNLL1P6-201ENST00000503440 264 ntBASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP2Q9UDT6 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms