Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 RNA5SP24-201ENST00000516478 95 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 MIR1254-2-201ENST00000579553 63 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 MIR4325-201ENST00000583049 90 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 VN1R90P-201ENST00000595717 726 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 AC007621.1-201ENST00000604544 437 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 HMGB1P51-201ENST00000605166 638 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 AC073111.2-201ENST00000605657 1075 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 AC009090.3-201ENST00000616553 565 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 AC097372.4-201ENST00000625025 466 ntBASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.89□□□□□ -2.11
COMMD3Q9UBI1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 RNU1-52P-201ENST00000384190 164 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 U3.40-201ENST00000408706 208 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 RNU4-72P-201ENST00000410754 173 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC073264.1-201ENST00000411508 416 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 NANOGP5-201ENST00000424456 877 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 MTCO3P30-201ENST00000426425 670 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AL645638.1-201ENST00000440519 361 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC111193.1-201ENST00000504097 155 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC234781.5-201ENST00000508429 271 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC113155.1-201ENST00000511141 769 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 CCNHP1-201ENST00000513311 678 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC117525.1-201ENST00000515228 503 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 UBTFL10-201ENST00000528532 562 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 NDUFS5P6-201ENST00000529136 295 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 CR383656.14-201ENST00000551951 406 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC023158.1-201ENST00000561632 1025 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 MTCYBP28-201ENST00000566728 1132 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 XIAPP1-201ENST00000603162 600 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC009314.1-201ENST00000603871 304 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC006023.1-201ENST00000603944 259 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 ATP1B3P1-201ENST00000605365 821 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 MIR6798-201ENST00000612887 67 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AL137790.1-201ENST00000634283 177 ntBASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
COMMD3Q9UBI1 AC007342.9-201ENST00000623877 1385 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 RNU6-374P-201ENST00000364146 108 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 MIR23B-201ENST00000384832 97 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 KRR1P1-201ENST00000419430 803 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 RPL7P30-201ENST00000420888 709 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 RPS27P21-201ENST00000486977 252 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 RPL23AP49-201ENST00000492925 468 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 SERPINE4P-201ENST00000554978 281 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 AC090616.3-201ENST00000582184 217 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 ELOCP29-201ENST00000588193 334 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 AL354950.1-201ENST00000614150 568 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 AP005212.4-201ENST00000614206 710 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 AC009159.1-201ENST00000618386 642 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 AC093591.3-201ENST00000634516 308 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.87□□□□□ -2.11
COMMD3Q9UBI1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.86□□□□□ -2.11
COMMD3Q9UBI1 KPNA2P1-201ENST00000458289 1591 ntBASIC1.86□□□□□ -2.11
COMMD3Q9UBI1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.86□□□□□ -2.11
COMMD3Q9UBI1 ANKRD36P1-201ENST00000344424 659 ntBASIC1.86□□□□□ -2.11
COMMD3Q9UBI1 RNU6-673P-201ENST00000365084 104 ntBASIC1.86□□□□□ -2.11
COMMD3Q9UBI1 MIR221-201ENST00000385135 110 ntBASIC1.86□□□□□ -2.11
COMMD3Q9UBI1 MT-TC-201ENST00000387405 66 ntBASIC1.86□□□□□ -2.11
COMMD3Q9UBI1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
COMMD3Q9UBI1 RNA5SP171-201ENST00000391071 115 ntBASIC1.86□□□□□ -2.11
COMMD3Q9UBI1 AL355497.1-201ENST00000406262 551 ntBASIC1.86□□□□□ -2.11
COMMD3Q9UBI1 RNU4-78P-201ENST00000410940 126 ntBASIC1.86□□□□□ -2.11
COMMD3Q9UBI1 RPL17P12-201ENST00000413391 526 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms