Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
CHD7Q9P2D1 AC093536.2-201ENST00000565257 1406 ntBASIC1.84□□□□□ -2.11
CHD7Q9P2D1 AC019155.1-201ENST00000382242 574 ntBASIC1.84□□□□□ -2.12
CHD7Q9P2D1 RNU6-1-201ENST00000383898 107 ntBASIC1.84□□□□□ -2.12
CHD7Q9P2D1 RNU6-42P-201ENST00000384165 107 ntBASIC1.84□□□□□ -2.12
CHD7Q9P2D1 RNU6-36P-201ENST00000384172 107 ntBASIC1.84□□□□□ -2.12
CHD7Q9P2D1 RNU6-4P-201ENST00000384205 107 ntBASIC1.84□□□□□ -2.12
CHD7Q9P2D1 RNU6-5P-201ENST00000384238 107 ntBASIC1.84□□□□□ -2.12
CHD7Q9P2D1 RNU6-3P-201ENST00000384314 107 ntBASIC1.84□□□□□ -2.12
CHD7Q9P2D1 RNU6-2-201ENST00000384627 107 ntBASIC1.84□□□□□ -2.12
CHD7Q9P2D1 RNU6-9-201ENST00000384776 107 ntBASIC1.84□□□□□ -2.12
CHD7Q9P2D1 RNU6-33P-201ENST00000384793 107 ntBASIC1.84□□□□□ -2.12
CHD7Q9P2D1 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.84□□□□□ -2.12
CHD7Q9P2D1 SNORA70.14-201ENST00000516205 110 ntBASIC1.84□□□□□ -2.12
CHD7Q9P2D1 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.84□□□□□ -2.12
CHD7Q9P2D1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
CHD7Q9P2D1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.12
CHD7Q9P2D1 RNU6-6P-201ENST00000606623 107 ntBASIC1.84□□□□□ -2.12
CHD7Q9P2D1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
CHD7Q9P2D1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.84□□□□□ -2.12
CHD7Q9P2D1 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
CHD7Q9P2D1 CDC27P2-201ENST00000425026 1922 ntBASIC1.84□□□□□ -2.12
CHD7Q9P2D1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
CHD7Q9P2D1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
CHD7Q9P2D1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.83□□□□□ -2.12
CHD7Q9P2D1 RNY1-201ENST00000364228 113 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CHD7Q9P2D1 RPS3AP9-201ENST00000417027 792 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 AC129850.1-201ENST00000436203 508 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 AP000705.1-201ENST00000454567 350 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.83□□□□□ -2.12
CHD7Q9P2D1 AC105429.2-201ENST00000610567 517 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.83□□□□□ -2.12
CHD7Q9P2D1 Y_RNA.205-201ENST00000364128 113 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 AL162388.1-201ENST00000450912 352 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.83□□□□□ -2.12
CHD7Q9P2D1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.83□□□□□ -2.12
CHD7Q9P2D1 AC087441.2-201ENST00000529141 262 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 PDCD5P1-201ENST00000543528 309 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 VN1R79P-201ENST00000593540 513 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CHD7Q9P2D1 AC006378.2-201ENST00000623178 2476 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CHD7Q9P2D1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.83□□□□□ -2.12
CHD7Q9P2D1 XKRY2-201ENST00000442362 1093 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 AMD1P1-201ENST00000457220 922 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 AC025033.1-201ENST00000463883 194 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CHD7Q9P2D1 RPS3AP23-202ENST00000574601 686 ntBASIC1.83□□□□□ -2.12
CHD7Q9P2D1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CHD7Q9P2D1 LTV1P1-201ENST00000510683 1237 ntBASIC1.82□□□□□ -2.12
CHD7Q9P2D1 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.82□□□□□ -2.12
CHD7Q9P2D1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.82□□□□□ -2.12
CHD7Q9P2D1 AC022709.1-201ENST00000615967 87 ntBASIC1.82□□□□□ -2.12
CHD7Q9P2D1 MIR3199-2-201ENST00000636243 86 ntBASIC1.82□□□□□ -2.12
CHD7Q9P2D1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CHD7Q9P2D1 UBE2L2-201ENST00000254302 429 ntBASIC1.82□□□□□ -2.12
CHD7Q9P2D1 RNU6-53P-201ENST00000365367 106 ntBASIC1.82□□□□□ -2.12
CHD7Q9P2D1 POLHP1-201ENST00000411806 470 ntBASIC1.82□□□□□ -2.12
CHD7Q9P2D1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.82□□□□□ -2.12
CHD7Q9P2D1 PIGFP3-201ENST00000441918 722 ntBASIC1.82□□□□□ -2.12
CHD7Q9P2D1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.82□□□□□ -2.12
CHD7Q9P2D1 AC234775.3-201ENST00000564612 656 ntBASIC1.82□□□□□ -2.12
CHD7Q9P2D1 AC060766.3-201ENST00000591442 263 ntBASIC1.82□□□□□ -2.12
CHD7Q9P2D1 AC009314.1-201ENST00000603871 304 ntBASIC1.82□□□□□ -2.12
CHD7Q9P2D1 AC019159.1-201ENST00000605094 187 ntBASIC1.82□□□□□ -2.12
CHD7Q9P2D1 MTND4P23-201ENST00000447723 1363 ntBASIC1.82□□□□□ -2.12
CHD7Q9P2D1 TAS2R15P-201ENST00000390674 928 ntBASIC1.81□□□□□ -2.12
CHD7Q9P2D1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.81□□□□□ -2.12
CHD7Q9P2D1 AL357520.1-201ENST00000441557 453 ntBASIC1.81□□□□□ -2.12
CHD7Q9P2D1 HMGB3P15-201ENST00000507326 574 ntBASIC1.81□□□□□ -2.12
CHD7Q9P2D1 RN7SKP40-201ENST00000517211 242 ntBASIC1.81□□□□□ -2.12
CHD7Q9P2D1 MIR4285-201ENST00000581001 85 ntBASIC1.81□□□□□ -2.12
CHD7Q9P2D1 AF127577.6-201ENST00000623352 2191 ntBASIC1.81□□□□□ -2.12
CHD7Q9P2D1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CHD7Q9P2D1 PSMA3P-201ENST00000555485 635 ntBASIC1.81□□□□□ -2.12
CHD7Q9P2D1 AC104581.2-201ENST00000572227 430 ntBASIC1.81□□□□□ -2.12
CHD7Q9P2D1 MIR4421-201ENST00000578133 69 ntBASIC1.81□□□□□ -2.12
CHD7Q9P2D1 CKAP2P1-201ENST00000555477 2049 ntBASIC1.81□□□□□ -2.12
CHD7Q9P2D1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
CHD7Q9P2D1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CHD7Q9P2D1 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CHD7Q9P2D1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.8□□□□□ -2.12
CHD7Q9P2D1 RPL23AP20-201ENST00000447965 421 ntBASIC1.8□□□□□ -2.12
CHD7Q9P2D1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.8□□□□□ -2.12
CHD7Q9P2D1 AC006390.1-201ENST00000508068 283 ntBASIC1.8□□□□□ -2.12
CHD7Q9P2D1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.8□□□□□ -2.12
CHD7Q9P2D1 AL137847.3-201ENST00000611521 109 ntBASIC1.8□□□□□ -2.12
CHD7Q9P2D1 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.8□□□□□ -2.12
CHD7Q9P2D1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CHD7Q9P2D1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CHD7Q9P2D1 EXOC5P1-201ENST00000510543 1969 ntBASIC1.8□□□□□ -2.12
CHD7Q9P2D1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.8□□□□□ -2.12
CHD7Q9P2D1 MTCYBP31-201ENST00000438855 1122 ntBASIC1.8□□□□□ -2.12
CHD7Q9P2D1 BNIP3P2-201ENST00000441221 577 ntBASIC1.8□□□□□ -2.12
CHD7Q9P2D1 HMGN1P7-201ENST00000491722 313 ntBASIC1.8□□□□□ -2.12
CHD7Q9P2D1 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CHD7Q9P2D1 AL731537.2-201ENST00000561565 951 ntBASIC1.8□□□□□ -2.12
CHD7Q9P2D1 AC103987.3-201ENST00000582071 292 ntBASIC1.8□□□□□ -2.12
CHD7Q9P2D1 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms