Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL157394.1-201ENST00000562983 1224 ntBASIC4.37□□□□□ -1.71
COL20A1Q9P218 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.37□□□□□ -1.71
COL20A1Q9P218 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.37□□□□□ -1.71
COL20A1Q9P218 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.37□□□□□ -1.71
COL20A1Q9P218 AL049634.3-201ENST00000604968 457 ntBASIC4.37□□□□□ -1.71
COL20A1Q9P218 AC121334.2-201ENST00000605387 271 ntBASIC4.37□□□□□ -1.71
COL20A1Q9P218 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.37□□□□□ -1.71
COL20A1Q9P218 AC072046.2-201ENST00000618366 268 ntBASIC4.37□□□□□ -1.71
COL20A1Q9P218 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.37□□□□□ -1.71
COL20A1Q9P218 AC002550.2-201ENST00000621246 394 ntBASIC4.37□□□□□ -1.71
COL20A1Q9P218 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL20A1Q9P218 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL20A1Q9P218 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL20A1Q9P218 AC009902.3-201ENST00000606235 2172 ntBASIC4.37□□□□□ -1.71
COL20A1Q9P218 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL20A1Q9P218 AC095050.2-201ENST00000510748 1458 ntBASIC4.37□□□□□ -1.71
COL20A1Q9P218 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL20A1Q9P218 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL20A1Q9P218 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL20A1Q9P218 RNA5SP52-201ENST00000362448 134 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 SNORA5A-201ENST00000384111 134 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 Y_RNA.582-201ENST00000391023 95 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 Y_RNA.599-201ENST00000410489 109 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 Y_RNA.619-201ENST00000410951 90 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC093578.1-201ENST00000415219 368 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 MTCO1P21-201ENST00000416634 589 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 RPL17P49-201ENST00000443728 411 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL20A1Q9P218 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 RPL7P15-201ENST00000461190 712 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC011825.1-201ENST00000484967 388 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 RAC1P2-201ENST00000511164 579 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 SNORA18.6-201ENST00000516792 115 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 AF186190.1-201ENST00000517470 480 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL20A1Q9P218 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 NRBF2P1-201ENST00000587407 859 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 BNIP3P33-201ENST00000598912 569 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 CKS1BP3-201ENST00000600888 237 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC010680.3-201ENST00000604215 520 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 AL031176.1-201ENST00000604554 466 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 RNU1-30P-201ENST00000606575 163 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 LINC00901.1-201ENST00000617252 152 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC009159.1-201ENST00000618386 642 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC068792.1-201ENST00000621354 417 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 AL356585.4-201ENST00000623078 1229 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 AC099654.13-201ENST00000639774 207 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL20A1Q9P218 MTND5P33-201ENST00000571250 1450 ntBASIC4.36□□□□□ -1.71
COL20A1Q9P218 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL20A1Q9P218 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL20A1Q9P218 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL20A1Q9P218 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL20A1Q9P218 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC244517.1-201ENST00000606030 2086 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL20A1Q9P218 RNU6-1215P-201ENST00000384441 102 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 MIR513A2-201ENST00000385249 127 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 RPL21P17-201ENST00000397467 475 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 AF274854.1-201ENST00000413236 615 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC069157.1-201ENST00000421749 137 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 SNORA71B-202ENST00000439232 272 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC069285.2-201ENST00000440210 275 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 AL031667.1-201ENST00000440222 725 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC096751.1-202ENST00000502691 1067 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC138853.1-201ENST00000503549 823 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC022616.6-201ENST00000520479 119 ntBASIC4.35□□□□□ -1.71
COL20A1Q9P218 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms