Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC112191.3-201ENST00000604371 277 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AC104662.1-201ENST00000604448 511 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AL450472.3-201ENST00000615578 367 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AC104010.1-201ENST00000616889 150 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AL360181.4-201ENST00000621752 134 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AC090582.1-201ENST00000636321 199 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AC010149.2-201ENST00000637608 315 ntBASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HCN3Q9P1Z3 AL390237.1-201ENST00000404226 1415 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 RNA5SP322-201ENST00000363617 119 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 SNORA57.1-201ENST00000391227 145 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 FCF1P10-201ENST00000407590 479 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 RPS3AP24-201ENST00000407896 734 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 HMGN1P24-201ENST00000412282 298 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 DUTP6-201ENST00000425573 462 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AC010153.1-201ENST00000432862 727 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AC004866.2-201ENST00000438285 481 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 ST13P20-201ENST00000447996 1065 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 RPL23AP31-201ENST00000456160 467 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 RPL7P15-201ENST00000461190 712 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AC092451.1-201ENST00000480211 153 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 VN1R104P-201ENST00000505115 1009 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 MTND4P2-201ENST00000507767 1203 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 IGKV2-38-201ENST00000517443 247 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 IGHV3-32-201ENST00000519182 355 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 HMGN1P28-201ENST00000521340 364 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AP002453.2-201ENST00000533503 320 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AP000873.5-201ENST00000533906 236 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AC123904.2-201ENST00000548059 300 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 RSL24D1P11-201ENST00000591045 491 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 BNIP3P8-201ENST00000597863 560 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AL109618.2-201ENST00000605527 211 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AL355472.4-201ENST00000610233 626 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AC004825.2-201ENST00000616634 455 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AC012150.2-201ENST00000621300 544 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AL161637.1-201ENST00000622380 412 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AL159972.1-201ENST00000625150 448 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AC244258.1-201ENST00000637553 1071 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AC024560.2-201ENST00000507981 1497 ntBASIC3.78□□□□□ -1.8
HCN3Q9P1Z3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.78□□□□□ -1.81
HCN3Q9P1Z3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC007685.1-201ENST00000329806 452 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 RNU4-91P-201ENST00000364778 135 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 RNU6-432P-201ENST00000384196 109 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 Y_RNA.553-201ENST00000384670 102 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 SNORA48.7-201ENST00000391302 135 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 RPL7P25-201ENST00000404151 721 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AL138878.1-201ENST00000405131 347 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 Y_RNA.608-201ENST00000410647 95 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 RPS7P13-201ENST00000413955 498 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 USP9YP13-201ENST00000417797 480 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 RPL7P2-201ENST00000427639 268 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 FTH1P1-201ENST00000437933 532 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 RPS29P7-201ENST00000439662 171 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC092641.1-201ENST00000440229 772 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 MTCO1P19-201ENST00000443487 500 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 SNRPFP4-201ENST00000456366 242 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC055855.1-201ENST00000489563 579 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC010460.1-201ENST00000507087 466 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 RNA5SP179-201ENST00000517284 121 ntBASIC3.77□□□□□ -1.81
HCN3Q9P1Z3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms