Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AL137014.1-201ENST00000420490 1226 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AL353678.1-201ENST00000422735 741 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AC012498.1-201ENST00000424037 437 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 EZH2P1-201ENST00000431167 291 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AC109583.1-201ENST00000432156 268 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 Z96811.1-201ENST00000445880 108 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 USP9YP34-201ENST00000453983 808 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AC092757.1-201ENST00000467293 467 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 FAM60DP-201ENST00000524174 632 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 OR5AK1P-201ENST00000524837 922 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 OR4R2P-201ENST00000530815 597 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 MIR2682-201ENST00000580305 110 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 MIR4506-201ENST00000584693 77 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AL583856.2-201ENST00000606298 543 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AL162274.2-201ENST00000614406 332 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 AC009464.1-201ENST00000615731 469 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 CYCSP41-201ENST00000616920 296 ntBASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
KLHL28Q9NXS3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
KLHL28Q9NXS3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 SNORA63.3-201ENST00000362682 132 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 MIR634-201ENST00000385208 97 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 RPL21P3-201ENST00000395517 478 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 RPL7P27-201ENST00000403775 720 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 RN7SKP220-201ENST00000410611 288 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AC108734.1-201ENST00000439549 399 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 UBBP3-201ENST00000445497 241 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AL359385.1-201ENST00000456509 365 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AC146507.2-201ENST00000460608 476 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AC009901.1-201ENST00000506703 541 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 RAC1P5-201ENST00000512182 576 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 RNA5SP385-201ENST00000515947 110 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 BNIP3P24-201ENST00000593398 557 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AC078899.3-201ENST00000599065 212 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 U6.101-201ENST00000637707 76 ntBASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
KLHL28Q9NXS3 AC108206.1-201ENST00000570186 4159 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 RNU6-707P-201ENST00000364647 95 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 SNORD21-201ENST00000383953 95 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 SNORD15B-201ENST00000384714 146 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 MIR506-201ENST00000384998 124 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 RNU6-882P-201ENST00000391025 103 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 RPL21P75-201ENST00000396599 483 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC110754.1-201ENST00000399740 601 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 RPL21P28-201ENST00000401418 483 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AL592114.1-201ENST00000403842 483 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 BTF3P8-201ENST00000414577 526 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 RPL21P2-201ENST00000440049 481 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 RPS12P18-201ENST00000442381 270 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AP001992.1-205ENST00000462248 379 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 RPL21P39-201ENST00000463605 483 ntBASIC2.89□□□□□ -1.95
KLHL28Q9NXS3 AC011979.1-201ENST00000472300 483 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms