Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNU6-956P-201ENST00000458868 103 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 NIPA2P2-201ENST00000496376 1083 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 RPL23AP55-201ENST00000498163 452 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 KLHL2P1-201ENST00000508691 521 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AC026801.2-201ENST00000515352 425 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 MIR2114-201ENST00000516645 80 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AC022878.1-201ENST00000530684 149 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AP000907.2-201ENST00000530827 353 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 OR5D17P-201ENST00000531492 978 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 BNIP3P5-201ENST00000562290 498 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 MTCYBP33-201ENST00000575007 1130 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AL359999.1-201ENST00000604513 294 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AL022099.1-201ENST00000604551 712 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AC064872.1-201ENST00000604823 1072 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AC092140.2-201ENST00000618027 521 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AC009878.1-201ENST00000621819 340 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AC090582.1-201ENST00000636321 199 ntBASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.66□□□□□ -1.82
SLC6A13Q9NSD5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
SLC6A13Q9NSD5 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.65□□□□□ -1.82
SLC6A13Q9NSD5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.65□□□□□ -1.82
SLC6A13Q9NSD5 RNU6-600P-201ENST00000362524 99 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 Y_RNA.553-201ENST00000384670 102 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 OR6C69P-201ENST00000394268 893 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 HLFP1-201ENST00000402375 499 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 RNU4-6P-201ENST00000410804 122 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 RPL21P32-201ENST00000419877 477 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 RPL17P36-201ENST00000420302 549 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 MTCO1P39-201ENST00000426148 480 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 RPL21P66-201ENST00000426566 466 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 Z74696.2-201ENST00000436514 498 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC092641.1-201ENST00000440229 772 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AL049734.2-201ENST00000441066 616 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 RAC1P7-201ENST00000445367 377 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 NUTF2P3-201ENST00000448540 384 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 CEACAMP4-201ENST00000457676 421 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 snoU13.4-201ENST00000458916 104 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 RPL23AP62-201ENST00000463396 453 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC084198.1-201ENST00000477747 402 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 TMED11P-201ENST00000479478 690 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AP001086.1-201ENST00000494882 321 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 MLLT10P2-201ENST00000506434 249 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 MTND4P2-201ENST00000507767 1203 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC004062.1-201ENST00000509926 645 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 NPM1P41-201ENST00000512920 831 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 PAICSP4-201ENST00000517543 1253 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC135279.1-201ENST00000543493 504 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC099489.2-201ENST00000574976 260 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC087752.4-201ENST00000605911 462 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AL355472.4-201ENST00000610233 626 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC012531.5-201ENST00000611375 151 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AL590240.3-201ENST00000621416 943 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC091905.1-201ENST00000624400 311 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC068724.3-201ENST00000625906 87 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 TAB3P1-202ENST00000452645 1634 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 AC116096.1-201ENST00000566804 2314 ntBASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SLC6A13Q9NSD5 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 RNU6-173P-201ENST00000364215 104 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 RNU6-637P-201ENST00000384050 107 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 RNU6-328P-201ENST00000390887 106 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 HSPE1P8-201ENST00000406997 288 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 RPS3AP24-201ENST00000407896 734 ntBASIC3.64□□□□□ -1.83
SLC6A13Q9NSD5 RNU6-516P-201ENST00000411381 104 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 412.2 ms