Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 NPM1P49-201ENST00000448027 714 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AL033528.1-201ENST00000453780 140 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 BX322784.1-201ENST00000455793 1077 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 RPS20P32-201ENST00000456044 356 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 snoU109.1-201ENST00000459339 135 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 RPL7P15-201ENST00000461190 712 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 RPS29P19-201ENST00000479709 171 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 LARP1BP2-201ENST00000486594 519 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 RPL7P24-201ENST00000493052 752 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 RPL37P25-201ENST00000507308 276 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC006390.1-201ENST00000508068 283 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 FTH1P21-201ENST00000512179 511 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC034159.1-201ENST00000513885 583 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AP000889.1-201ENST00000530968 660 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AL121603.1-201ENST00000553815 142 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 MIR5697-201ENST00000578045 78 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 BNIP3P8-201ENST00000597863 560 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 BBIP1P1-201ENST00000602999 279 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AL390208.1-201ENST00000605885 644 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC069200.1-201ENST00000609511 323 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AL713922.2-201ENST00000619384 716 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AL139089.1-201ENST00000620372 975 ntBASIC4.28□□□□□ -1.72
VPS45Q9NRW7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS45Q9NRW7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AP001350.1-201ENST00000601906 1524 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 RNU6-28P-201ENST00000362378 107 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 Y_RNA.41-201ENST00000362646 102 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 RNU6-769P-201ENST00000384407 104 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 Y_RNA.516-201ENST00000384541 124 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 RNA5SP36-201ENST00000410197 133 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 RNU6-712P-201ENST00000410558 100 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 RNU4-78P-201ENST00000410940 126 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 RAD23BP2-201ENST00000416003 1207 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 MTND1P4-201ENST00000435196 415 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AC091862.1-201ENST00000438016 1100 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 RPL23AP46-201ENST00000438548 490 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AC005297.2-201ENST00000450430 606 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 HMGB1P15-201ENST00000453854 435 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 RN7SL585P-201ENST00000470538 280 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 RPL9P33-201ENST00000484311 566 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 RNU6-1095P-201ENST00000516148 108 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 RNA5SP519-201ENST00000516480 119 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AC063950.1-201ENST00000552036 308 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 MIR5685-201ENST00000579080 79 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 MTATP6P3-201ENST00000581686 676 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AC025946.2-201ENST00000603398 234 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AL451044.1-201ENST00000604867 238 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 BCRP9-201ENST00000605312 388 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 AC092794.1-201ENST00000612734 582 ntBASIC4.27□□□□□ -1.73
VPS45Q9NRW7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
VPS45Q9NRW7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms