Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Y_RNA.372-201ENST00000365599 102 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 RNU6-114P-201ENST00000384704 105 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 MIR554-201ENST00000384874 96 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 MIR548F1-201ENST00000408667 84 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 MIR1179-201ENST00000408703 91 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 AL358934.1-201ENST00000432346 324 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 AL121871.1-201ENST00000443413 436 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 RNU7-59P-201ENST00000459101 61 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 RN7SL542P-201ENST00000467147 294 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VTA1Q9NP79 AP002812.1-201ENST00000495378 474 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 AC008694.2-201ENST00000517591 306 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 AC011979.2-201ENST00000527568 352 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 PDCD5P1-201ENST00000543528 309 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 AC022655.2-201ENST00000577280 318 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VTA1Q9NP79 AL139286.1-201ENST00000604465 483 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 MIR98-201ENST00000606724 119 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 MIR92B-201ENST00000607575 96 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 AC017083.3-201ENST00000609955 700 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 MIR7151-201ENST00000617477 60 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 AP006248.2-201ENST00000623309 592 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 BMS1P21-201ENST00000634565 365 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VTA1Q9NP79 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 Y_RNA.1-201ENST00000352915 104 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 Y_RNA.248-201ENST00000364501 109 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 SNORD66.1-201ENST00000391230 76 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 RPL7P60-201ENST00000397636 735 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 RN7SKP159-201ENST00000410657 292 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 MTND1P23-201ENST00000416931 372 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AL137014.1-201ENST00000420490 1226 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 BEND7P1-201ENST00000422058 457 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AL391219.1-201ENST00000422570 483 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AC019097.1-201ENST00000424783 735 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VTA1Q9NP79 RPL31P35-201ENST00000431058 377 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 AC002486.1-201ENST00000435098 391 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 TIMM9P1-201ENST00000436122 256 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 RPS17P13-201ENST00000448974 407 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 MTAPP1-201ENST00000489154 819 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AC093278.1-201ENST00000494700 600 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AC010342.1-201ENST00000514047 877 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AC023632.4-201ENST00000517783 191 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 AC107934.1-201ENST00000522215 217 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 FAM92A1P1-201ENST00000528023 890 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 MIR4429-201ENST00000580105 73 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 AC007363.1-201ENST00000604736 620 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 TUG1_1.1-201ENST00000610654 145 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AL603758.1-201ENST00000618654 241 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AL356321.1-201ENST00000621360 228 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 AL159972.1-201ENST00000625150 448 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 MIR6715B-201ENST00000637172 77 ntBASIC4.72□□□□□ -1.65
VTA1Q9NP79 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
VTA1Q9NP79 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VTA1Q9NP79 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VTA1Q9NP79 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VTA1Q9NP79 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
VTA1Q9NP79 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VTA1Q9NP79 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VTA1Q9NP79 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VTA1Q9NP79 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.71□□□□□ -1.65
VTA1Q9NP79 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VTA1Q9NP79 RNU5E-1-201ENST00000362477 120 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 RNU6-1097P-201ENST00000363586 107 ntBASIC4.71□□□□□ -1.66
VTA1Q9NP79 RNU4-1-201ENST00000363925 141 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 699.6 ms