Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NCOR1P3-201ENST00000420479 303 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 MTCO3P46-201ENST00000425787 232 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC234779.1-201ENST00000425910 285 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC108059.2-201ENST00000434626 151 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC092809.1-201ENST00000441469 474 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 PPIAP3-201ENST00000450588 505 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 RPL23AP71-201ENST00000470966 469 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 RPS27P23-201ENST00000487608 251 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC013356.1-201ENST00000489027 564 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 PTP4A1P6-201ENST00000531034 478 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC069240.1-201ENST00000548774 375 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC084783.1-201ENST00000565846 910 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC005668.1-201ENST00000571142 476 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.78□□□□□ -1.64
CD248Q9HCU0 SNORA74C-1-201ENST00000580726 201 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC008782.1-201ENST00000603386 430 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC005191.1-201ENST00000603950 358 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC090948.1-201ENST00000607464 549 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 DISC2.1-201ENST00000612827 205 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC004825.2-201ENST00000616634 455 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 AC125257.1-201ENST00000560400 2930 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 MTND5P1-201ENST00000445440 1375 ntBASIC4.78□□□□□ -1.64
CD248Q9HCU0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD248Q9HCU0 MAPK10-253ENST00000641010 4072 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.77□□□□□ -1.65
CD248Q9HCU0 MAPK10-286ENST00000641208 8747 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 Y_RNA.145-201ENST00000363527 102 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 SNORA4.3-201ENST00000365564 137 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 Y_RNA.381-201ENST00000365666 102 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 RNU6-463P-201ENST00000384340 107 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 MIR559-201ENST00000385188 96 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 AL162578.1-201ENST00000406202 378 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 RN7SKP177-201ENST00000410567 355 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 SNRPFP1-201ENST00000414761 252 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 OR51AB1P-201ENST00000429046 620 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 RPEP2-201ENST00000432149 701 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 SNRPEP7-201ENST00000438350 220 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 AL353748.1-201ENST00000440753 474 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 IPO7P1-201ENST00000442031 636 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 ARL2BPP10-201ENST00000446487 531 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 RPS27AP15-201ENST00000447672 466 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD248Q9HCU0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD248Q9HCU0 AC015724.1-201ENST00000478577 156 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.77□□□□□ -1.65
CD248Q9HCU0 RPL36AP41-201ENST00000493820 306 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.77□□□□□ -1.65
CD248Q9HCU0 RNU6-835P-201ENST00000516974 104 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 RNU6-709P-201ENST00000517257 104 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.77□□□□□ -1.65
CD248Q9HCU0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.77□□□□□ -1.65
CD248Q9HCU0 AC100770.1-201ENST00000532310 322 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.77□□□□□ -1.65
CD248Q9HCU0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.77□□□□□ -1.65
CD248Q9HCU0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.77□□□□□ -1.65
CD248Q9HCU0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 RN7SL652P-201ENST00000577769 300 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 BCRP9-201ENST00000605312 388 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 AC020634.1-201ENST00000608701 549 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.77□□□□□ -1.65
CD248Q9HCU0 MIR6864-201ENST00000617935 70 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 AC018926.3-201ENST00000618841 406 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 AC009248.2-201ENST00000619826 254 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 C2orf27A-204ENST00000623058 969 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 OR52H1-202ENST00000641796 1061 ntBASIC4.77□□□□□ -1.65
CD248Q9HCU0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD248Q9HCU0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD248Q9HCU0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CD248Q9HCU0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CD248Q9HCU0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CD248Q9HCU0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.76□□□□□ -1.65
CD248Q9HCU0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD248Q9HCU0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CD248Q9HCU0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD248Q9HCU0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.76□□□□□ -1.65
CD248Q9HCU0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CD248Q9HCU0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD248Q9HCU0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CD248Q9HCU0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD248Q9HCU0 SNRPEP3-201ENST00000338402 276 ntBASIC4.76□□□□□ -1.65
CD248Q9HCU0 RNU6-777P-201ENST00000364265 104 ntBASIC4.76□□□□□ -1.65
CD248Q9HCU0 RNU6-359P-201ENST00000365466 108 ntBASIC4.76□□□□□ -1.65
CD248Q9HCU0 RNU6-769P-201ENST00000384407 104 ntBASIC4.76□□□□□ -1.65
CD248Q9HCU0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CD248Q9HCU0 RNU1-82P-201ENST00000390851 165 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms