Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 ZNF519P1-201ENST00000449011 1626 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 RNU4-92P-201ENST00000363783 136 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 RNU6-637P-201ENST00000384050 107 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 SPA17P1-201ENST00000416656 452 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AL353705.1-201ENST00000433468 480 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AC002381.1-201ENST00000447049 280 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 PAXBP1P1-201ENST00000449315 447 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 ZNF886P-201ENST00000450781 723 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 MTND2P24-201ENST00000453434 806 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 RN7SL93P-201ENST00000463035 293 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AC021382.1-201ENST00000483523 359 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AC108729.1-201ENST00000487812 947 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 MTND3P3-201ENST00000505004 126 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 SLC25A15P5-201ENST00000508033 253 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 RN7SKP83-201ENST00000516512 178 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 RNA5SP291-201ENST00000517222 105 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AC008011.1-201ENST00000545989 227 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 MIR4509-3-201ENST00000578671 94 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 MIR4509-2-201ENST00000583920 94 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AL133507.1-201ENST00000605269 557 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 MIR4509-1-201ENST00000618224 94 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AC079597.1-201ENST00000624306 508 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 AC244205.2-202ENST00000635781 342 ntBASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.61□□□□□ -1.67
CHMP4AQ9BY43 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 MTND5P24-201ENST00000438892 1767 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 DDX10P1-201ENST00000448545 1933 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 RNU4-68P-201ENST00000364314 141 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 MIR514A1-201ENST00000385133 98 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 RNU6-952P-201ENST00000391164 108 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AL356320.2-201ENST00000417263 507 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AL365396.1-201ENST00000430854 671 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AC091286.1-201ENST00000431233 461 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AF228730.2-201ENST00000438784 848 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AC093392.2-201ENST00000450682 337 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 RPL21P134-201ENST00000453468 483 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 BX322784.1-201ENST00000455793 1077 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 RPS29P12-201ENST00000460178 152 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AC022662.1-201ENST00000580252 331 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AC008121.2-201ENST00000614647 523 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AC068880.5-201ENST00000624331 290 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 AC012321.1-201ENST00000561622 1588 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.6□□□□□ -1.67
CHMP4AQ9BY43 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 ATP5F1P4-201ENST00000397288 746 ntBASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 MTCYBP38-201ENST00000417160 1123 ntBASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 AL513175.2-201ENST00000422071 443 ntBASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 AL389915.1-201ENST00000422463 466 ntBASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 AC018630.2-202ENST00000422992 927 ntBASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 UBE2V1P13-201ENST00000436983 439 ntBASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 AC034236.1-201ENST00000469891 373 ntBASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 RN7SL594P-201ENST00000470590 287 ntBASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 SNORA31.22-201ENST00000517204 135 ntBASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 CASP1P1-201ENST00000526345 212 ntBASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 OR5B10P-201ENST00000532869 642 ntBASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 DUXAP3-201ENST00000603616 594 ntBASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 AL136363.1-201ENST00000605349 337 ntBASIC4.59□□□□□ -1.67
CHMP4AQ9BY43 AC006270.3-201ENST00000605967 1036 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms