Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 XGY1-201ENST00000381172 446 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AL450338.1-201ENST00000407987 512 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 RPS3AP3-201ENST00000411933 242 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AC092634.6-201ENST00000418558 192 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 RPL7P30-201ENST00000420888 709 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 SKP1P1-201ENST00000438081 489 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 TPT1P14-201ENST00000448018 505 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 KCTD9P5-201ENST00000504141 1170 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 MTND5P4-201ENST00000514978 288 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AP001893.2-201ENST00000526949 202 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AL157687.1-201ENST00000554853 619 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 HNRNPCP4-201ENST00000571636 900 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 MIR3913-1-201ENST00000577744 102 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 MIR5697-201ENST00000578045 78 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 MIR4512-201ENST00000583257 77 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AL117336.2-201ENST00000602435 335 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 DUXAP4-201ENST00000603046 613 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AC008536.2-201ENST00000607284 349 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AL590282.1-201ENST00000610379 1136 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 AC027290.2-201ENST00000623210 18662 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 OR4G11P-202ENST00000642116 1414 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 OR52B1P-201ENST00000316506 909 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 RNU6-251P-201ENST00000363235 104 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 C1DP2-201ENST00000418167 426 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 MTCO3P1-205ENST00000422088 832 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 SDCBPP2-201ENST00000424643 885 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 ZYG11AP1-201ENST00000430329 837 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC109583.1-201ENST00000432156 268 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AP000542.1-201ENST00000448473 371 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 snoU13.24-201ENST00000458998 104 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC008628.2-201ENST00000502605 298 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 HMGB1P29-201ENST00000505659 499 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC020593.1-201ENST00000507399 299 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 SAP18P1-201ENST00000512058 390 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 RNU6-507P-201ENST00000516045 100 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 RNU6-875P-201ENST00000516488 106 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC008562.1-201ENST00000521763 330 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AP006245.1-201ENST00000522549 120 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 RAB11AP2-201ENST00000545905 639 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC090616.5-202ENST00000582111 297 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 BNIP3P9-201ENST00000603714 553 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC091488.1-201ENST00000604239 660 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC112191.3-201ENST00000604371 277 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AL139286.1-201ENST00000604465 483 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AL049634.3-201ENST00000604968 457 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC008277.2-201ENST00000605196 797 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC010133.1-201ENST00000615809 842 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC231657.1-201ENST00000624313 397 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 GDI2P1-201ENST00000429312 1336 ntBASIC4.54□□□□□ -1.68
SALL3Q9BXA9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SALL3Q9BXA9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 FARSBP1-201ENST00000435808 1778 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms