Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AP003122.5-201ENST00000527668 3766 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 RNU6-582P-201ENST00000362989 107 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 SNORD116-23-201ENST00000384645 92 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 RNA5SP252-201ENST00000391131 119 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AL136372.1-201ENST00000403060 228 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 FCF1P2-201ENST00000415284 583 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AL096701.2-201ENST00000416920 238 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 RPL7P44-201ENST00000424827 742 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AC011242.1-201ENST00000433596 1158 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AC004866.2-201ENST00000438285 481 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AC241584.1-201ENST00000438469 1241 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 RPL23AP58-201ENST00000440453 469 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 RPS29P12-201ENST00000460178 152 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 RPL32P14-201ENST00000463196 378 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AC008571.1-201ENST00000467232 300 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 OR52A4P-202ENST00000481634 799 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 RPL9P33-201ENST00000484311 566 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 RPL7P23-201ENST00000493874 747 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AC112518.2-201ENST00000508565 425 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 MTND5P4-201ENST00000514978 288 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 RNA5SP135-201ENST00000517019 125 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 FAM60DP-201ENST00000524174 632 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 LARP7P3-201ENST00000579888 337 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AC138761.3-201ENST00000579993 334 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 GLUD1P4-201ENST00000590914 418 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AC245036.5-201ENST00000596330 847 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 RPL12P50-201ENST00000603116 116 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AL671309.1-201ENST00000603750 544 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AP002826.1-201ENST00000608835 315 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AC008083.4-201ENST00000615076 444 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AC007275.1-201ENST00000621243 671 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AL353748.2-201ENST00000622148 471 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AL512506.2-201ENST00000624472 458 ntBASIC2.05□□□□□ -2.08
UPK3BQ9BT76 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
UPK3BQ9BT76 AL589826.1-201ENST00000340697 249 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 RNU6-7-201ENST00000364784 107 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 RNU6-8-201ENST00000365467 107 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AL590004.2-201ENST00000404787 371 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 MIR1289-1-201ENST00000408836 144 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 DBF4P1-201ENST00000412976 1892 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 BX682237.1-201ENST00000415016 335 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AC022018.1-201ENST00000430685 241 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 Z96811.1-201ENST00000445880 108 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 GXYLT1P1-201ENST00000446657 490 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 OR51B8P-201ENST00000449892 769 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 RNU7-140P-201ENST00000459546 60 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AP004217.1-201ENST00000480579 346 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 RN7SL20P-201ENST00000488827 297 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AC080014.1-201ENST00000496877 1201 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AC010374.2-201ENST00000512933 535 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AC091564.4-201ENST00000533934 2194 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AC068339.2-201ENST00000534395 618 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 SULT1C2P1-202ENST00000562418 459 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AL355596.1-201ENST00000565399 3996 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AP002906.1-201ENST00000603405 233 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AL022099.1-201ENST00000604551 712 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AC079791.1-201ENST00000605356 973 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 BNIP3P19-201ENST00000605397 577 ntBASIC2.04□□□□□ -2.08
UPK3BQ9BT76 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
UPK3BQ9BT76 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms