Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 RNA5SP322-201ENST00000363617 119 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 DUTP6-201ENST00000425573 462 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 COX6B1P7-201ENST00000430845 235 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 MTND6P13-201ENST00000443510 523 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AC099563.1-201ENST00000456086 418 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 RPL7P19-201ENST00000469948 618 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 TMED11P-201ENST00000479478 690 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 RPL7P24-201ENST00000493052 752 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 KLHL2P1-201ENST00000508691 521 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AC022483.1-201ENST00000514020 567 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 MTCO2P32-201ENST00000514865 403 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 MIR2116-201ENST00000517221 80 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AP003730.1-201ENST00000524605 285 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AP004242.1-201ENST00000533701 349 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 FAM60BP-201ENST00000578364 658 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AL360181.4-201ENST00000621752 134 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AC112200.1-201ENST00000625015 234 ntBASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCGF1Q9BSM1 LARP1BP1-201ENST00000506036 1359 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 RNU6-600P-201ENST00000362524 99 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 RNU1-14P-201ENST00000362759 152 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 OR5H15-201ENST00000383696 930 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 RNA5SP306-201ENST00000411087 107 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 RNU6-516P-201ENST00000411381 104 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AC007899.1-201ENST00000412776 775 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 SPA17P1-201ENST00000416656 452 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AL161631.1-201ENST00000417933 486 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AL138799.3-201ENST00000438968 350 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 MTND1P27-201ENST00000451117 902 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 TPT1P7-201ENST00000458300 517 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 snoU109.1-201ENST00000459339 135 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 FTH1P2-201ENST00000466086 412 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AL049830.2-201ENST00000480072 201 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AC004062.1-201ENST00000509926 645 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AC026801.2-201ENST00000515352 425 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 RN7SKP244-201ENST00000516513 307 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AC125611.2-201ENST00000551907 647 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AGGF1P4-201ENST00000568249 801 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 MIR4528-201ENST00000577763 90 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 MIR5047-201ENST00000579212 100 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 COX6CP3-201ENST00000580869 223 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 MIR3118-1-201ENST00000581787 76 ntBASIC3.51□□□□□ -1.85
PCGF1Q9BSM1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms