Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.62□□□□□ -2.15
COL12A1Q99715 AC093331.1-201ENST00000521474 169 ntBASIC1.62□□□□□ -2.15
COL12A1Q99715 AC004486.1-201ENST00000546846 233 ntBASIC1.62□□□□□ -2.15
COL12A1Q99715 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.62□□□□□ -2.15
COL12A1Q99715 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.62□□□□□ -2.15
COL12A1Q99715 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.62□□□□□ -2.15
COL12A1Q99715 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.62□□□□□ -2.15
COL12A1Q99715 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
COL12A1Q99715 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL12A1Q99715 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL12A1Q99715 AC092326.2-201ENST00000624772 1561 ntBASIC1.62□□□□□ -2.15
COL12A1Q99715 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
COL12A1Q99715 MTND5P12-201ENST00000502851 1449 ntBASIC1.62□□□□□ -2.15
COL12A1Q99715 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.62□□□□□ -2.15
COL12A1Q99715 AP000852.1-201ENST00000472460 573 ntBASIC1.62□□□□□ -2.15
COL12A1Q99715 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
COL12A1Q99715 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
COL12A1Q99715 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
COL12A1Q99715 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
COL12A1Q99715 UBE2V1P6-201ENST00000430840 422 ntBASIC1.61□□□□□ -2.15
COL12A1Q99715 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.61□□□□□ -2.15
COL12A1Q99715 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.61□□□□□ -2.15
COL12A1Q99715 GZMAP1-201ENST00000503054 631 ntBASIC1.61□□□□□ -2.15
COL12A1Q99715 SNORA25.15-201ENST00000516487 89 ntBASIC1.61□□□□□ -2.15
COL12A1Q99715 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.61□□□□□ -2.15
COL12A1Q99715 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.61□□□□□ -2.15
COL12A1Q99715 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.61□□□□□ -2.15
COL12A1Q99715 AC010678.1-201ENST00000614118 713 ntBASIC1.61□□□□□ -2.15
COL12A1Q99715 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.61□□□□□ -2.15
COL12A1Q99715 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL12A1Q99715 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.61□□□□□ -2.15
COL12A1Q99715 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.61□□□□□ -2.15
COL12A1Q99715 AC244033.1-201ENST00000426826 870 ntBASIC1.61□□□□□ -2.15
COL12A1Q99715 SAR1AP4-201ENST00000429225 591 ntBASIC1.61□□□□□ -2.15
COL12A1Q99715 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.61□□□□□ -2.15
COL12A1Q99715 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.61□□□□□ -2.15
COL12A1Q99715 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL12A1Q99715 AC022336.2-201ENST00000568966 2538 ntBASIC1.61□□□□□ -2.15
COL12A1Q99715 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.61□□□□□ -2.15
COL12A1Q99715 AC005336.3-201ENST00000623833 2679 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 RNU6-1032P-201ENST00000384100 107 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 MUPP-201ENST00000438111 566 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.6□□□□□ -2.15
COL12A1Q99715 RPS29P1-201ENST00000465274 159 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 AC023043.3-201ENST00000593113 385 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 AL356575.1-201ENST00000603008 283 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 AL139286.1-201ENST00000604465 483 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 AL627309.6-201ENST00000606857 840 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 AL353748.2-201ENST00000622148 471 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.6□□□□□ -2.15
COL12A1Q99715 SETP10-201ENST00000424368 814 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.6□□□□□ -2.15
COL12A1Q99715 AL160237.3-201ENST00000604114 1013 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 AC105429.2-201ENST00000610567 517 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 AC241377.1-201ENST00000619797 406 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 CKAP2P1-201ENST00000555477 2049 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 AC002546.1-201ENST00000588041 2504 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL12A1Q99715 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.6□□□□□ -2.15
COL12A1Q99715 AC244505.4-201ENST00000434905 287 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 SSXP5-201ENST00000443473 287 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 GSTA11P-201ENST00000452866 669 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 CALM1P2-201ENST00000452941 448 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.6□□□□□ -2.15
COL12A1Q99715 RPL21P18-201ENST00000469899 480 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 AF131216.2-201ENST00000512316 564 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 RNA5SP476-201ENST00000516613 103 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.6□□□□□ -2.15
COL12A1Q99715 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.6□□□□□ -2.15
COL12A1Q99715 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.6□□□□□ -2.15
COL12A1Q99715 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.6□□□□□ -2.15
COL12A1Q99715 AC012119.1-201ENST00000603184 222 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 AP001148.1-201ENST00000624124 2359 ntBASIC1.6□□□□□ -2.15
COL12A1Q99715 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL12A1Q99715 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.15
COL12A1Q99715 RNU6-53P-201ENST00000365367 106 ntBASIC1.59□□□□□ -2.15
COL12A1Q99715 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.59□□□□□ -2.15
COL12A1Q99715 BNIP3P2-201ENST00000441221 577 ntBASIC1.59□□□□□ -2.15
COL12A1Q99715 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.59□□□□□ -2.15
COL12A1Q99715 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.59□□□□□ -2.15
COL12A1Q99715 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.59□□□□□ -2.15
COL12A1Q99715 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.59□□□□□ -2.15
COL12A1Q99715 MYL12BP1-201ENST00000569826 507 ntBASIC1.59□□□□□ -2.15
COL12A1Q99715 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.59□□□□□ -2.15
COL12A1Q99715 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.59□□□□□ -2.15
COL12A1Q99715 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.59□□□□□ -2.15
COL12A1Q99715 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.59□□□□□ -2.16
COL12A1Q99715 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
COL12A1Q99715 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
COL12A1Q99715 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.59□□□□□ -2.16
COL12A1Q99715 Z98749.2-208ENST00000381646 500 ntBASIC1.59□□□□□ -2.16
COL12A1Q99715 DEFA7P-201ENST00000382676 285 ntBASIC1.59□□□□□ -2.16
COL12A1Q99715 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.59□□□□□ -2.16
COL12A1Q99715 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.59□□□□□ -2.16
COL12A1Q99715 PTP4A1P6-201ENST00000531034 478 ntBASIC1.59□□□□□ -2.16
COL12A1Q99715 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.59□□□□□ -2.16
COL12A1Q99715 AP000787.2-201ENST00000604432 568 ntBASIC1.59□□□□□ -2.16
COL12A1Q99715 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
COL12A1Q99715 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.16
COL12A1Q99715 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms