Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 MTCYBP34-201ENST00000439552 670 ntBASIC3.49□□□□□ -1.85
CDCA3Q99618 AL356535.1-201ENST00000440335 398 ntBASIC3.49□□□□□ -1.85
CDCA3Q99618 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.49□□□□□ -1.85
CDCA3Q99618 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.49□□□□□ -1.85
CDCA3Q99618 HMGB3P8-201ENST00000449709 577 ntBASIC3.49□□□□□ -1.85
CDCA3Q99618 USP9YP34-201ENST00000453983 808 ntBASIC3.49□□□□□ -1.85
CDCA3Q99618 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.49□□□□□ -1.85
CDCA3Q99618 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.49□□□□□ -1.85
CDCA3Q99618 AC114981.1-201ENST00000503897 678 ntBASIC3.49□□□□□ -1.85
CDCA3Q99618 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.49□□□□□ -1.85
CDCA3Q99618 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDCA3Q99618 PSMA2P1-201ENST00000526365 646 ntBASIC3.49□□□□□ -1.85
CDCA3Q99618 UBTFL10-201ENST00000528532 562 ntBASIC3.49□□□□□ -1.85
CDCA3Q99618 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.49□□□□□ -1.85
CDCA3Q99618 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.49□□□□□ -1.85
CDCA3Q99618 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.49□□□□□ -1.85
CDCA3Q99618 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.49□□□□□ -1.85
CDCA3Q99618 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.49□□□□□ -1.85
CDCA3Q99618 MIR4999-201ENST00000585029 91 ntBASIC3.49□□□□□ -1.85
CDCA3Q99618 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.49□□□□□ -1.85
CDCA3Q99618 AC112220.3-201ENST00000605502 502 ntBASIC3.49□□□□□ -1.85
CDCA3Q99618 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.49□□□□□ -1.85
CDCA3Q99618 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CDCA3Q99618 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDCA3Q99618 NUP58P1-201ENST00000502546 1738 ntBASIC3.49□□□□□ -1.85
CDCA3Q99618 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDCA3Q99618 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.48□□□□□ -1.85
CDCA3Q99618 AL365361.1-201ENST00000566942 3481 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 SGO1P2-201ENST00000429458 1589 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CDCA3Q99618 RNU6-989P-201ENST00000362756 107 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 DHFRP6-201ENST00000401776 268 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AL121972.1-201ENST00000402023 252 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 RNA5SP56-201ENST00000410277 118 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.48□□□□□ -1.85
CDCA3Q99618 Z99755.1-201ENST00000414048 380 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 VPS26BP1-201ENST00000417155 755 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.48□□□□□ -1.85
CDCA3Q99618 RPL21P109-201ENST00000422213 475 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AC011233.1-201ENST00000422812 283 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 GLRXP1-201ENST00000423261 334 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 ATP5C1P1-201ENST00000441945 895 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.48□□□□□ -1.85
CDCA3Q99618 AL357552.1-201ENST00000445254 415 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 RPS20P24-201ENST00000457473 361 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AC097493.1-201ENST00000463958 372 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 RPL23AP67-201ENST00000465341 474 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDCA3Q99618 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.48□□□□□ -1.85
CDCA3Q99618 AC078785.3-201ENST00000476607 425 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AC090453.1-201ENST00000495560 436 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 RPL5P23-201ENST00000496040 868 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AC147055.4-201ENST00000504399 745 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.48□□□□□ -1.85
CDCA3Q99618 AC006499.2-201ENST00000513470 337 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 RN7SKP83-201ENST00000516512 178 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CDCA3Q99618 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.48□□□□□ -1.85
CDCA3Q99618 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.48□□□□□ -1.85
CDCA3Q99618 AL121603.1-201ENST00000553815 142 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 CYCSP2-201ENST00000558168 301 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.48□□□□□ -1.85
CDCA3Q99618 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.48□□□□□ -1.85
CDCA3Q99618 AC067852.3-201ENST00000589177 561 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AL669831.4-202ENST00000590817 238 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 RPL12P50-201ENST00000603116 116 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AL355812.1-201ENST00000603215 216 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.48□□□□□ -1.85
CDCA3Q99618 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.48□□□□□ -1.85
CDCA3Q99618 RNVU1-4-201ENST00000612985 164 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AL136981.2-201ENST00000617319 734 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.48□□□□□ -1.85
CDCA3Q99618 U6.98-201ENST00000637157 84 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDCA3Q99618 AP000526.1-201ENST00000603308 1388 ntBASIC3.48□□□□□ -1.85
CDCA3Q99618 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDCA3Q99618 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDCA3Q99618 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDCA3Q99618 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDCA3Q99618 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CDCA3Q99618 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDCA3Q99618 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDCA3Q99618 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDCA3Q99618 SNORA5B-201ENST00000363786 132 ntBASIC3.47□□□□□ -1.85
CDCA3Q99618 RNU6-931P-201ENST00000363850 107 ntBASIC3.47□□□□□ -1.85
CDCA3Q99618 RNU6-1200P-201ENST00000384162 107 ntBASIC3.47□□□□□ -1.85
CDCA3Q99618 PIGPP2-201ENST00000411569 458 ntBASIC3.47□□□□□ -1.85
CDCA3Q99618 RAP1BP1-201ENST00000412709 553 ntBASIC3.47□□□□□ -1.85
CDCA3Q99618 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.47□□□□□ -1.85
CDCA3Q99618 MTCYBP38-201ENST00000417160 1123 ntBASIC3.47□□□□□ -1.85
CDCA3Q99618 AL049610.1-201ENST00000423374 372 ntBASIC3.47□□□□□ -1.85
CDCA3Q99618 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CDCA3Q99618 RPL35AP12-201ENST00000425362 338 ntBASIC3.47□□□□□ -1.85
CDCA3Q99618 PSMA6P3-201ENST00000428242 164 ntBASIC3.47□□□□□ -1.85
CDCA3Q99618 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.47□□□□□ -1.85
CDCA3Q99618 YWHAZP7-201ENST00000436906 631 ntBASIC3.47□□□□□ -1.85
CDCA3Q99618 MTND1P26-201ENST00000440488 538 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms