Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PKP4Q99569 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKP4Q99569 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKP4Q99569 RNU6-989P-201ENST00000362756 107 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 RNU6-433P-201ENST00000363216 104 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 RNA5SP515-201ENST00000364570 118 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PKP4Q99569 RNU6-723P-201ENST00000383973 107 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 U1.1-201ENST00000384101 164 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 AL450338.1-201ENST00000407987 512 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 RN7SKP56-201ENST00000410513 331 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 RN7SKP263-201ENST00000411194 309 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 RPL17P12-201ENST00000413391 526 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP4Q99569 MTND1P23-201ENST00000416931 372 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 RPL21P32-201ENST00000419877 477 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP4Q99569 EIF1P1-201ENST00000421436 341 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 RPL21P66-201ENST00000426566 466 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 AC104651.1-201ENST00000427559 735 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PKP4Q99569 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP4Q99569 ATP5HP2-201ENST00000433885 485 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.75□□□□□ -1.81
PKP4Q99569 AC091862.1-201ENST00000438016 1100 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PKP4Q99569 AL831737.1-201ENST00000441288 271 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP4Q99569 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PKP4Q99569 AC126182.1-201ENST00000478134 357 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 VN1R105P-201ENST00000486595 910 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 AC109464.2-201ENST00000510242 943 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.75□□□□□ -1.81
PKP4Q99569 RNU6-352P-201ENST00000516908 107 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 RNU6-1073P-201ENST00000517182 106 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 MED28P5-201ENST00000528254 438 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.75□□□□□ -1.81
PKP4Q99569 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP4Q99569 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP4Q99569 ZNF519P3-201ENST00000557158 1032 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 AC090877.1-201ENST00000561418 344 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 BNIP3P5-201ENST00000562290 498 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.75□□□□□ -1.81
PKP4Q99569 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.75□□□□□ -1.81
PKP4Q99569 AC053481.4-201ENST00000583164 216 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 AL589743.7-201ENST00000612637 233 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 AC013476.2-201ENST00000614456 459 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.75□□□□□ -1.81
PKP4Q99569 AL356596.1-201ENST00000624230 379 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.75□□□□□ -1.81
PKP4Q99569 AC099654.12-201ENST00000639868 649 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
PKP4Q99569 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.75□□□□□ -1.81
PKP4Q99569 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.75□□□□□ -1.81
PKP4Q99569 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.75□□□□□ -1.81
PKP4Q99569 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PKP4Q99569 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PKP4Q99569 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PKP4Q99569 LINC00561-201ENST00000565815 2738 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.74□□□□□ -1.81
PKP4Q99569 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PKP4Q99569 RNU6-462P-201ENST00000362659 105 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 RNA5SP258-201ENST00000362750 119 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
PKP4Q99569 RNU6-348P-201ENST00000384386 107 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PKP4Q99569 RNU4-78P-201ENST00000410940 126 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 RPL17P36-201ENST00000420302 549 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 AL389915.1-201ENST00000422463 466 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 AL953862.1-201ENST00000423016 168 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP4Q99569 AL035410.1-201ENST00000427409 427 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP4Q99569 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.74□□□□□ -1.81
PKP4Q99569 AL356535.1-201ENST00000440335 398 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP4Q99569 MTCO1P48-201ENST00000448024 1096 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP4Q99569 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP4Q99569 NIPA2P2-201ENST00000496376 1083 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 MTCYBP17-201ENST00000503579 789 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.74□□□□□ -1.81
PKP4Q99569 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP4Q99569 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.74□□□□□ -1.81
PKP4Q99569 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP4Q99569 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP4Q99569 DEFB131D-201ENST00000526803 184 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.74□□□□□ -1.81
PKP4Q99569 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.74□□□□□ -1.81
PKP4Q99569 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.74□□□□□ -1.81
PKP4Q99569 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.74□□□□□ -1.81
PKP4Q99569 MIR3160-1-201ENST00000577972 85 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 RN7SL703P-201ENST00000578485 302 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.74□□□□□ -1.81
PKP4Q99569 MIR4286-201ENST00000580651 93 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 AC005771.1-201ENST00000585581 349 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.74□□□□□ -1.81
PKP4Q99569 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.74□□□□□ -1.81
PKP4Q99569 AC126118.1-201ENST00000607744 628 ntBASIC3.74□□□□□ -1.81
PKP4Q99569 AL355073.2-201ENST00000612106 557 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms