Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 ATP5F1P1-201ENST00000433775 569 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 AC098826.1-201ENST00000433943 471 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 SNORA84-201ENST00000459229 133 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 NAP1L1P3-201ENST00000462291 880 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 AC108734.3-201ENST00000481241 1165 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 NDUFB4P2-201ENST00000509515 391 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 AC025857.1-201ENST00000525252 377 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 AGGF1P5-201ENST00000567900 919 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 AC079880.2-201ENST00000603790 1213 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 APOOP1-201ENST00000604695 592 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 AL137003.2-201ENST00000606924 2538 ntBASIC1.82□□□□□ -2.12
AP1S3Q96PC3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
AP1S3Q96PC3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 RNU6-859P-201ENST00000362728 107 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 RNU1-112P-201ENST00000364401 164 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 RNU6-1074P-201ENST00000383995 104 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 RNU2-40P-201ENST00000410833 196 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AL592148.1-201ENST00000413568 445 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AL356379.1-201ENST00000414105 126 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AC099677.1-201ENST00000420575 175 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 NDUFB4P6-201ENST00000436819 366 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 IPO7P1-201ENST00000442031 636 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 NANOGNBP1-201ENST00000448444 480 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 RSL24D1P3-201ENST00000449255 495 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 MRPL35P4-201ENST00000453682 566 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 FTH1P2-201ENST00000466086 412 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 RPL23AP45-201ENST00000476406 468 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AC022493.1-201ENST00000492984 337 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 TTC39CP1-201ENST00000512513 755 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AC096725.1-201ENST00000514266 313 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AC104057.1-201ENST00000515547 497 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AP003102.1-201ENST00000525638 661 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AC243972.3-201ENST00000539655 198 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AL442163.2-201ENST00000553912 710 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 RPL23AP84-201ENST00000571193 464 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AL356280.1-201ENST00000603614 379 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AC138473.1-201ENST00000605717 526 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AC093732.2-201ENST00000607950 274 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AL159169.3-201ENST00000608871 561 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 UCA1.1-201ENST00000620952 75 ntBASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
AP1S3Q96PC3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 FAM133CP-201ENST00000332869 704 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 RNA5SP456-201ENST00000364002 114 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 SNORA3A-201ENST00000364113 130 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 RNU1-85P-201ENST00000364127 164 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 RNU6-198P-201ENST00000384258 104 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 SSXP10-201ENST00000402595 565 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AL355497.1-201ENST00000406262 551 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AL512504.1-201ENST00000415494 778 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 ARL2BPP3-201ENST00000421226 480 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AL358232.1-201ENST00000448030 501 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AL139109.1-201ENST00000455491 297 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 BX510359.1-201ENST00000456973 237 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AC107626.1-201ENST00000471084 183 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AC093663.2-201ENST00000484625 313 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AC008885.2-201ENST00000509506 930 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AC112673.1-201ENST00000513168 575 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 HMGB1P23-201ENST00000518743 568 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms