Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RN7SKP24-201ENST00000515888 284 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 RN7SKP82-201ENST00000516786 223 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 MIR4646-201ENST00000580775 63 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AL355812.1-201ENST00000603215 216 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AC092747.3-201ENST00000603769 301 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AP005432.2-201ENST00000608162 586 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AC019193.3-201ENST00000609144 554 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 OR52H1-202ENST00000641796 1061 ntBASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.76□□□□□ -1.65
PTCHD1Q96NR3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 TPTE2P4-201ENST00000258589 1605 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC004817.4-201ENST00000602396 3625 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 EXOC5P1-201ENST00000510543 1969 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 MAPK10-304ENST00000641341 3984 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 SNORA22B-201ENST00000383876 138 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AL645733.1-201ENST00000402250 217 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AL139396.1-201ENST00000421137 167 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 BX323845.1-201ENST00000432417 179 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 RPL34P20-201ENST00000442771 351 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AL354714.3-201ENST00000447284 493 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 RPL7P43-201ENST00000478876 753 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC108078.2-201ENST00000510750 236 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 RNU6-256P-201ENST00000516747 97 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 RNA5SP454-201ENST00000517231 127 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 NDUFB4P11-201ENST00000560510 395 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC040958.1-201ENST00000561102 201 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 MIR4691-201ENST00000583764 85 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC104662.1-201ENST00000604448 511 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AL008729.2-201ENST00000606393 473 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC022893.3-201ENST00000607665 437 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC091905.4-201ENST00000623432 202 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC244517.12-201ENST00000623581 663 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 GABPAP-201ENST00000419271 1356 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 AC073136.1-201ENST00000449426 2884 ntBASIC4.75□□□□□ -1.65
PTCHD1Q96NR3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AC007823.1-201ENST00000569932 1566 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AC011155.1-201ENST00000316512 456 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 RPL32P3-201ENST00000359025 275 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 Y_RNA.31-201ENST00000362574 102 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 RNU6-1284P-201ENST00000363701 100 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL078599.1-201ENST00000402075 293 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 RNU6-387P-201ENST00000411331 105 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 CYCSP10-201ENST00000417973 294 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AC008065.1-201ENST00000428525 348 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AL451139.1-201ENST00000434718 346 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 FABP5P14-201ENST00000437273 393 ntBASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.74□□□□□ -1.65
PTCHD1Q96NR3 RPL32P28-201ENST00000443577 397 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms