Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 MIR3682-201ENST00000581338 84 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AC107304.1-201ENST00000604229 296 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 RNU4-89P-201ENST00000607443 133 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AC128687.2-201ENST00000609657 566 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AC009159.1-201ENST00000618386 642 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AC068137.3-201ENST00000639191 341 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AC099654.12-201ENST00000639868 649 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AC073869.6-201ENST00000640656 341 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 MTND5P26-201ENST00000426018 1752 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 U3.20-201ENST00000390909 217 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AL022722.2-201ENST00000402519 180 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 CCNG1P1-201ENST00000406783 885 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 SNORA3C-201ENST00000408792 125 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 Y_RNA.625-201ENST00000411256 107 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AC004552.1-201ENST00000419089 348 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AL391219.1-201ENST00000422570 483 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 C8orf59P1-201ENST00000429930 303 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 UBE2V1P13-201ENST00000436983 439 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 RABEPKP1-201ENST00000440529 1026 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AC104308.1-201ENST00000454621 333 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 RPL9P32-201ENST00000464118 620 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 RPS26P3-201ENST00000470205 348 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 RN7SL860P-201ENST00000473738 223 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 ST13P14-201ENST00000474095 734 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AC090543.2-201ENST00000483963 348 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AC004057.1-201ENST00000485827 348 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 RNU2-46P-201ENST00000517038 113 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AP004371.1-201ENST00000525240 214 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AP003497.1-201ENST00000528472 562 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AC123904.2-201ENST00000548059 300 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AC060771.1-201ENST00000582031 164 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AC008638.3-201ENST00000603341 463 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AL161729.4-201ENST00000604650 476 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 RNU6-87P-201ENST00000607561 108 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AC095031.1-201ENST00000623685 672 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AC079597.1-201ENST00000624306 508 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 OR52H1-202ENST00000641796 1061 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AC027287.1-201ENST00000553115 1453 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 MTND5P33-201ENST00000571250 1450 ntBASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP3Q96JB5 FARSBP1-201ENST00000435808 1778 ntBASIC4.53□□□□□ -1.69
CDK5RAP3Q96JB5 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AC068254.2-201ENST00000623938 3577 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 GNG5P1-201ENST00000255500 204 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 Y_RNA.6-201ENST00000362350 114 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 U8.3-201ENST00000363321 132 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 RNA5SP130-201ENST00000364431 114 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 RNA5SP189-201ENST00000364920 115 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AL583834.1-201ENST00000406943 343 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AC092447.6-201ENST00000414578 210 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 UBE2V1P10-201ENST00000414685 269 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 BX295541.1-201ENST00000417774 250 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AL353777.1-201ENST00000425552 326 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 MTCO3P30-201ENST00000426425 670 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AC006548.1-201ENST00000427470 102 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 MRPS18BP2-201ENST00000434310 759 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 RPL21P112-201ENST00000434403 463 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 MTND1P4-201ENST00000435196 415 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 ANP32BP2-201ENST00000454525 545 ntBASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP3Q96JB5 snoU109.4-201ENST00000458953 143 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms