Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC099669.2-201ENST00000616549 437 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AL445363.3-201ENST00000623080 671 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AL138713.1-201ENST00000624026 2130 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC011944.2-201ENST00000624440 683 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 AC138915.3-201ENST00000562908 1389 ntBASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTHRC1Q96CG8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 OR5J1P-201ENST00000313544 939 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RNU1-108P-201ENST00000362556 161 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RNU6-1120P-201ENST00000362988 108 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RNU6-1090P-201ENST00000364065 94 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RNU1-132P-201ENST00000364300 164 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 SNORA70.2-201ENST00000364506 135 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 Y_RNA.295-201ENST00000364918 102 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RNY3P13-201ENST00000365542 102 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RNU6-108P-201ENST00000365558 107 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RNU6-877P-201ENST00000383868 107 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RNU6-483P-201ENST00000384088 108 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 MIR19A-201ENST00000384878 82 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RNU11-4P-201ENST00000391149 133 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RNU4-78P-201ENST00000410940 126 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AL161631.1-201ENST00000417933 486 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AL139413.1-201ENST00000421309 217 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AC007283.2-201ENST00000424739 197 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 CKS1BP5-201ENST00000434172 273 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AC140076.1-201ENST00000449897 361 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AC009963.2-201ENST00000453431 138 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RNU7-59P-201ENST00000459101 61 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RN7SL303P-201ENST00000469773 251 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 VWA8P1-201ENST00000510889 176 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AC008958.1-201ENST00000511047 682 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AC017037.2-201ENST00000513850 890 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RNA5SP49-201ENST00000516450 115 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 RNU6-528P-201ENST00000516926 100 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 NRON-201ENST00000517270 370 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AP003072.2-201ENST00000527756 676 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AL121579.1-201ENST00000555129 305 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AL359212.1-201ENST00000556608 614 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 MTND6P33-201ENST00000571794 183 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AP001330.5-201ENST00000607176 411 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 AC090229.1-201ENST00000590983 1609 ntBASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTHRC1Q96CG8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 Y_RNA.89-201ENST00000363031 102 ntBASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 RNA5SP366-201ENST00000365454 123 ntBASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 Y_RNA.548-201ENST00000384656 105 ntBASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 FGF7P8-201ENST00000402994 292 ntBASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 RNU6-516P-201ENST00000411381 104 ntBASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 AL160275.2-201ENST00000412010 394 ntBASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 RPS23P10-201ENST00000416185 486 ntBASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 CCDC58P2-201ENST00000417131 366 ntBASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 HMGB3P20-201ENST00000417997 600 ntBASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTHRC1Q96CG8 RPL35AP22-201ENST00000436855 335 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms