Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 Y_RNA.18-201ENST00000362461 102 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 RNU6-1214P-201ENST00000363650 109 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 MIR30B-201ENST00000384850 88 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 RSL24D1P4-201ENST00000400938 484 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 RNU6-516P-201ENST00000411381 104 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SKA1Q96BD8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC069157.1-201ENST00000421749 137 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 RPL7L1P10-201ENST00000427790 463 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 UBE2FP3-201ENST00000436366 524 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 HIGD1AP11-201ENST00000438361 280 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 AL590664.1-201ENST00000448065 339 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 AL359385.1-201ENST00000456509 365 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 snoU13.22-201ENST00000459428 104 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC004069.2-201ENST00000505438 1114 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 RNA5SP179-201ENST00000517284 121 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC034229.4-201ENST00000607861 441 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC039056.2-201ENST00000622261 511 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.95□□□□□ -1.78
SKA1Q96BD8 DDX10P1-201ENST00000448545 1933 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SKA1Q96BD8 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SKA1Q96BD8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
SKA1Q96BD8 AC021755.1-201ENST00000559747 1447 ntBASIC3.95□□□□□ -1.78
SKA1Q96BD8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SKA1Q96BD8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.94□□□□□ -1.78
SKA1Q96BD8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SKA1Q96BD8 AC012321.1-201ENST00000561622 1588 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
SKA1Q96BD8 SKINT1L-201ENST00000401057 817 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SKA1Q96BD8 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 BX842559.1-201ENST00000419615 532 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.94□□□□□ -1.78
SKA1Q96BD8 USP9YP36-201ENST00000424581 829 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 ARF4P2-201ENST00000430209 526 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 NDUFB4P6-201ENST00000436819 366 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 RPL35AP22-201ENST00000436855 335 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 AC091862.1-201ENST00000438016 1100 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.94□□□□□ -1.78
SKA1Q96BD8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.94□□□□□ -1.78
SKA1Q96BD8 ARPC3P2-201ENST00000457786 533 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SKA1Q96BD8 RNA5SP164-201ENST00000516533 110 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 SNORA31.22-201ENST00000517204 135 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 RNU6-711P-201ENST00000517255 106 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.94□□□□□ -1.78
SKA1Q96BD8 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.94□□□□□ -1.78
SKA1Q96BD8 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SKA1Q96BD8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.94□□□□□ -1.78
SKA1Q96BD8 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.94□□□□□ -1.78
SKA1Q96BD8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.94□□□□□ -1.78
SKA1Q96BD8 ZNF415P1-201ENST00000582279 1166 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.94□□□□□ -1.78
SKA1Q96BD8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.94□□□□□ -1.78
SKA1Q96BD8 AC015726.1-201ENST00000602353 681 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 AL357094.1-201ENST00000603845 844 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 AC084757.4-201ENST00000616350 526 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 AC021755.4-201ENST00000616620 456 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 AC009902.3-201ENST00000606235 2172 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SKA1Q96BD8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.94□□□□□ -1.78
SKA1Q96BD8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SKA1Q96BD8 CR381670.1-201ENST00000624291 1693 ntBASIC3.94□□□□□ -1.78
SKA1Q96BD8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SKA1Q96BD8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SKA1Q96BD8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SKA1Q96BD8 RNU5E-8P-201ENST00000363502 116 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 SNORD46.1-201ENST00000364139 104 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SKA1Q96BD8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SKA1Q96BD8 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SKA1Q96BD8 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.93□□□□□ -1.78
SKA1Q96BD8 RPL36AP33-201ENST00000450395 310 ntBASIC3.93□□□□□ -1.78
SKA1Q96BD8 MTND2P24-201ENST00000453434 806 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms