Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 BNIP3P38-201ENST00000601117 544 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AC099778.2-201ENST00000610904 211 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 FP236240.3-201ENST00000623061 327 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AC007490.1-201ENST00000624321 703 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 MIR6830-201ENST00000636015 70 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AC005183.1-201ENST00000603687 1979 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AL391994.1-201ENST00000254724 282 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 RNU6-433P-201ENST00000363216 104 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 RNU6-1214P-201ENST00000363650 109 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 RNU6-853P-201ENST00000364306 107 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 SNORA70C-201ENST00000384538 135 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 BX842559.1-201ENST00000419615 532 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 RPL17P36-201ENST00000420302 549 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AL356867.1-201ENST00000429623 299 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 OR4C10P-201ENST00000434991 931 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AL354941.1-201ENST00000438600 464 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 LSM1P1-201ENST00000438629 273 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AL117351.1-201ENST00000438864 766 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 ARPC3P2-201ENST00000457786 533 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 POU5F1P7-201ENST00000508759 541 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 MTND5P4-201ENST00000514978 288 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 RN7SKP122-201ENST00000515923 296 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 HMGN1P28-201ENST00000521340 364 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AP000926.4-201ENST00000527351 454 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AP003461.1-201ENST00000528866 78 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AC090888.2-201ENST00000559765 1144 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AC021171.1-201ENST00000603137 706 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AL606490.9-201ENST00000603331 271 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AL356596.1-201ENST00000624230 379 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 AP000553.6-201ENST00000641242 118 ntBASIC3.47□□□□□ -1.85
VPS33AQ96AX1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
VPS33AQ96AX1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
VPS33AQ96AX1 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.46□□□□□ -1.85
VPS33AQ96AX1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 SPRR2C-201ENST00000290702 219 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 SNORA36C-201ENST00000384289 132 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 RNU6-754P-201ENST00000391166 107 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC119751.3-201ENST00000399720 670 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 SNORA3.3-201ENST00000408712 125 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AL807761.1-201ENST00000417622 171 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 NDUFB4P7-201ENST00000423198 363 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC234781.2-201ENST00000426370 994 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AL117339.2-201ENST00000430475 180 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AL591503.2-201ENST00000442314 1005 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 RPL36AP33-201ENST00000450395 310 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 RPL30P14-201ENST00000482744 348 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC118282.1-201ENST00000506408 765 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 SNORA31.1-201ENST00000515993 133 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 SNORA31.5-201ENST00000516190 133 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AP006245.1-201ENST00000522549 120 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC087276.1-201ENST00000529659 480 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC007448.1-201ENST00000582714 234 ntBASIC3.46□□□□□ -1.86
VPS33AQ96AX1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS33AQ96AX1 AC068313.1-201ENST00000604028 1008 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms