Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ATP1B3P1-201ENST00000605365 821 ntBASIC2.22□□□□□ -2.05
RPS4Y2Q8TD47 OR2AS2P-201ENST00000606902 342 ntBASIC2.22□□□□□ -2.05
RPS4Y2Q8TD47 AL355810.1-201ENST00000614629 552 ntBASIC2.22□□□□□ -2.05
RPS4Y2Q8TD47 AC007998.5-201ENST00000622938 237 ntBASIC2.22□□□□□ -2.05
RPS4Y2Q8TD47 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.22□□□□□ -2.05
RPS4Y2Q8TD47 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.22□□□□□ -2.05
RPS4Y2Q8TD47 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.22□□□□□ -2.05
RPS4Y2Q8TD47 CUL1P1-201ENST00000509510 2425 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 RNU6-859P-201ENST00000362728 107 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 RNU6-799P-201ENST00000363567 107 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 RNU6-1005P-201ENST00000384519 107 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AL360182.1-201ENST00000397433 468 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 MTND4LP20-201ENST00000402379 270 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 FO393413.1-201ENST00000402892 195 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 RNA5SP38-201ENST00000410750 119 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 RNA5SP184-201ENST00000411071 108 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 TATDN1P1-201ENST00000414123 891 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC019097.1-201ENST00000424783 735 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 RPP40P1-201ENST00000426762 456 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC093422.3-201ENST00000428506 305 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 SGO1P2-201ENST00000429458 1589 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC004022.1-201ENST00000447766 1066 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC104073.1-201ENST00000451988 151 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC104108.1-201ENST00000509930 412 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 CKS1BP1-201ENST00000555221 240 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC022069.1-201ENST00000582910 658 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC025588.3-201ENST00000604182 274 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AL033523.1-201ENST00000605153 153 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 RPL23AP88-201ENST00000605759 454 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC073569.3-201ENST00000619055 682 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AP003485.2-201ENST00000623636 610 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AL590396.2-201ENST00000636511 1041 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 MTND2P41-201ENST00000637599 773 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 MTCO1P6-201ENST00000481192 1384 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 AC244517.1-201ENST00000606030 2086 ntBASIC2.21□□□□□ -2.06
RPS4Y2Q8TD47 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 VTRNA1-1-201ENST00000363120 99 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 RNU1-109P-201ENST00000383960 147 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 RNU6-921P-201ENST00000384361 107 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 ARF4P3-201ENST00000397387 509 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AL158825.1-201ENST00000414735 521 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 MTCO2P17-201ENST00000424336 677 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 HMGN3P1-201ENST00000453847 193 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 MTND3P24-201ENST00000506306 329 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 SEM1P1-201ENST00000506694 209 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 SNORA31.8-201ENST00000516327 108 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AC245100.7-201ENST00000609678 442 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 MIR1264-201ENST00000616374 69 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AC068722.2-201ENST00000618734 544 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AC095031.1-201ENST00000623685 672 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPS4Y2Q8TD47 AC016717.2-201ENST00000609089 5141 ntBASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 Y_RNA.510-201ENST00000384511 114 ntBASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 MIR649-201ENST00000384843 97 ntBASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 MIR196B-201ENST00000384852 84 ntBASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 RNU6-821P-201ENST00000390995 107 ntBASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 RNU6-77P-201ENST00000410554 91 ntBASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 RNA5SP492-201ENST00000411330 114 ntBASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 HMGN2P35-201ENST00000412164 270 ntBASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 BX682237.1-201ENST00000415016 335 ntBASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 AL096701.2-201ENST00000416920 238 ntBASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.19□□□□□ -2.06
RPS4Y2Q8TD47 RPS6P14-201ENST00000425165 719 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms