Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AL671862.1-201ENST00000515851 349 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 SNORA72.7-201ENST00000516349 94 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 Y_RNA.713-201ENST00000517013 96 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AF186190.1-201ENST00000517470 480 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 FAM60DP-201ENST00000524174 632 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AC122688.1-201ENST00000541494 223 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AC008521.1-201ENST00000587471 187 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AC012443.1-201ENST00000605605 231 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AC126915.2-201ENST00000610957 190 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AL359547.2-201ENST00000615810 418 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AP002799.1-201ENST00000623552 423 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 CYP3A51P-201ENST00000633513 256 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AL022323.4-201ENST00000623980 13120 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AC144833.1-201ENST00000567953 4089 ntBASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX2-3Q8TAU0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 RNY1P16-201ENST00000363063 111 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 Y_RNA.418-201ENST00000384029 102 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 RNU6-804P-201ENST00000384286 107 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 SNORA53-201ENST00000391141 249 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 AC087650.1-201ENST00000431445 468 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 CYCSP6-201ENST00000434498 302 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 RPL35AP22-201ENST00000436855 335 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 RPS11P7-201ENST00000442125 465 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 TRBV26-201ENST00000456572 344 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 RNU7-169P-201ENST00000459456 61 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 AC110792.1-201ENST00000491826 472 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 AC108078.2-201ENST00000510750 236 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 RNU2-69P-201ENST00000516061 100 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 AC004024.1-201ENST00000549244 247 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 AC009852.2-201ENST00000567898 485 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 AL138889.2-201ENST00000603883 242 ntBASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX2-3Q8TAU0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 SMG1P7-201ENST00000565246 2704 ntBASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 MIR133B-201ENST00000362210 119 ntBASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 U3.2-201ENST00000362981 210 ntBASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 RNU5B-2P-201ENST00000363036 113 ntBASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 RNU6-1020P-201ENST00000363684 107 ntBASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 RNU6-188P-201ENST00000364207 107 ntBASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 AC140479.3-201ENST00000418944 1126 ntBASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 SNORD97-201ENST00000459187 142 ntBASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 AC016559.2-201ENST00000510759 359 ntBASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 AC092436.3-201ENST00000511788 257 ntBASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.5□□□□□ -1.37
NKX2-3Q8TAU0 AC000095.2-202ENST00000637415 154 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms