Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC087190.4-201ENST00000574616 8334 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 RPL23AP57-201ENST00000332361 466 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 RNU5E-1-201ENST00000362477 120 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 RNU6-984P-201ENST00000363236 109 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 RN7SKP224-201ENST00000364140 325 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 RNU6-730P-201ENST00000383954 104 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 RNU6-456P-201ENST00000384493 107 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 RNU6-1158P-201ENST00000391167 107 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AL583835.1-201ENST00000399570 407 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 BTBD10P2-201ENST00000404779 676 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 RPL35AP12-201ENST00000425362 338 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AL353777.1-201ENST00000425552 326 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC016691.1-201ENST00000441321 413 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AL121877.1-201ENST00000453704 622 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC026410.2-201ENST00000460281 156 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 RPL7P22-201ENST00000466005 733 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC108145.1-201ENST00000503770 153 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC103851.1-201ENST00000506833 274 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC006499.6-201ENST00000511169 607 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 RNU6-488P-201ENST00000515918 99 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 RNU7-30P-201ENST00000516835 62 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC099489.2-201ENST00000574976 260 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 MIR3167-201ENST00000579623 85 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC023575.1-201ENST00000580510 358 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 MAGOH2P-202ENST00000584384 429 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 BX664608.1-201ENST00000610519 487 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 uc_338.5-201ENST00000611839 155 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC114781.5-201ENST00000615297 108 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AL021997.2-201ENST00000615674 271 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 RMST_7.1-201ENST00000621935 268 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC009161.2-201ENST00000624626 138 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC010149.2-201ENST00000637608 315 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC100810.6-201ENST00000638068 285 ntBASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMARCC2Q8TAQ2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 AC009313.2-201ENST00000417893 1941 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 RNA5SP52-201ENST00000362448 134 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 RNU6-1120P-201ENST00000362988 108 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 RNU6-444P-201ENST00000383988 108 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 RNU6-74P-201ENST00000384235 107 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 AL354719.1-201ENST00000406535 843 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 SNORA11F-201ENST00000408237 128 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 RPS23P10-201ENST00000416185 486 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 AC234782.4-201ENST00000417646 1048 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 FAM103A2P-201ENST00000444122 354 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 RPL23AP15-201ENST00000450202 459 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 RPL7P15-201ENST00000461190 712 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 RPL7P19-201ENST00000469948 618 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 RPS3AP50-201ENST00000487064 803 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 AC005912.1-201ENST00000495392 255 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 RNA5SP401-201ENST00000515920 127 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 AP005597.4-201ENST00000526762 229 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 CYP4A43P-201ENST00000568156 121 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 MIR432-201ENST00000606207 94 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 SNX18P1Y-201ENST00000616231 511 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 C2orf27A-204ENST00000623058 969 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 AP000843.1-201ENST00000624880 701 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 MIR6830-201ENST00000636015 70 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 MTND5P42-201ENST00000637720 498 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 AC090229.1-201ENST00000590983 1609 ntBASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.03□□□□□ -1.6
SMARCC2Q8TAQ2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SMARCC2Q8TAQ2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.02□□□□□ -1.61
SMARCC2Q8TAQ2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms