Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 ARL5AP4-201ENST00000430731 512 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 MTCO1P57-201ENST00000432182 261 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 RPS4XP6-201ENST00000477670 797 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC091917.2-201ENST00000505002 744 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC006445.2-201ENST00000510061 472 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC114781.4-201ENST00000513707 639 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 HAUS1P3-201ENST00000523909 662 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC087373.1-201ENST00000524920 491 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AP003102.1-201ENST00000525638 661 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AP003385.6-201ENST00000531603 374 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 TRAV11-201ENST00000539512 339 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC128657.1-201ENST00000549459 145 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC078814.3-201ENST00000553036 491 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC245036.5-201ENST00000596330 847 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 NRBF2P5-201ENST00000603087 788 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AC116312.1-201ENST00000606841 314 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 AP000526.1-201ENST00000603308 1388 ntBASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC112Q8NEF3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AC007336.1-201ENST00000576365 3828 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 ANAPC10P1-201ENST00000395991 556 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AL158825.1-201ENST00000414735 521 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 LINC01347-201ENST00000417964 355 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 FO393419.3-201ENST00000428741 282 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AL645638.1-201ENST00000440519 361 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 MRPL35P4-201ENST00000453682 566 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AC009901.1-201ENST00000506703 541 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 MTCO3P44-201ENST00000510977 541 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AC034159.1-201ENST00000513885 583 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AP002770.2-201ENST00000543613 532 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AC090666.1-201ENST00000578241 445 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AC008083.4-201ENST00000615076 444 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AC092650.2-201ENST00000619984 902 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 U4.3-201ENST00000621047 82 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AC007275.1-201ENST00000621243 671 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AC002064.3-201ENST00000623448 346 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AC010149.2-201ENST00000637608 315 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 ZNF734P-201ENST00000419494 1534 ntBASIC2.68□□□□□ -1.98
CCDC112Q8NEF3 AL359693.1-201ENST00000614959 2407 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 AL512646.1-201ENST00000269395 1077 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 MIR21-201ENST00000362134 72 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 MIRLET7G-201ENST00000362280 84 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 RNU6-989P-201ENST00000362756 107 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 RNA5SP508-201ENST00000411327 119 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 MTCO3P12-201ENST00000416718 547 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 FNDC3CP-201ENST00000420795 1155 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 SUMO1P4-201ENST00000429430 302 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 RAC1P5-201ENST00000512182 576 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 AC096725.1-201ENST00000514266 313 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 RNA5SP82-201ENST00000516707 92 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 HMGB1P46-201ENST00000520062 610 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 AC013412.1-201ENST00000610687 192 ntBASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CCDC112Q8NEF3 AC138915.1-201ENST00000565427 1685 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 RNA5SP126-201ENST00000365092 109 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 RN7SKP284-201ENST00000411002 343 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 RPL21P32-201ENST00000419877 477 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 RPL7P37-201ENST00000425095 738 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 Z93242.1-201ENST00000427102 353 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 AC079780.1-201ENST00000428259 207 ntBASIC2.66□□□□□ -1.98
CCDC112Q8NEF3 WARS2P1-201ENST00000429678 537 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms